cynR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''cynR'' | ''cynR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0335, b0338, JW5894''<ref name='LIB:Riley_2006'/> | ''ECK0335, b0338, JW5894''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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CynR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | CynR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Transcriptional activator of cyn operon<ref name='LIB:EcoGene'/> | Transcriptional activator of cyn operon<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B0338<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CynR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, cyn operon positive regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B0338<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CynR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, cyn operon positive regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IMP,IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:cynR|cynR]]<ref name='LIB:EcoCyc10.6'/>, OP00194 | transcription unit(s): [[:Category:Txn_unit:cynR|cynR]]<ref name='LIB:EcoCyc10.6'/>, OP00194 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=cynR&loc=MG1655:357914..357015,W3110:357914..357015,REL606:331246..330347 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=331246&end=330347&gene=cynR&aa=mlsrhinyflavaehgsftraasalhvsqpalsqqirqleeslgvplfdrsgrtirltdagevwrqyasralqelgagkraihdvadltrgslriavtptftsyfigplmadfyarypsitlqlqemsqekiedmlcrdeldvgiafapvhspeleaipllteslalvvaqhhplavheqvalsrlhdeklvllsaefatreqidhycekaglhpqvvieansisavlelirrtslstllpaaiatqhdglkaislappllertavllrrknswqtaaakaflhmaldkcavvggnesr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cynR+AND+escherichia+coli Pubmed(cynR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cynR Textpresso(cynR)] | |||
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Revision as of 00:05, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cynR |
|---|---|
| Gene Synonym(s) |
ECK0335, b0338, JW5894[1] |
| Product Desc. |
CynR transcriptional dual regulator[2][3] Transcriptional activator of cyn operon[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual regulator[1], B0338[2][1], CynR[2][1], cyn operon positive regulator[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The CynR translation start site has been verified by start codon mutagenesis (Lamblin, 1993). LysR family.[4]
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.