clcB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''clcB'' | ''clcB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1587, b1592, JW5263, mriT, ynfJ, yntJ''<ref name='LIB:Riley_2006'/> | ''ECK1587, b1592, JW5263, mriT, ynfJ, yntJ''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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YnfJ chloride ion ClC transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | YnfJ chloride ion ClC transporter<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Voltage-gated ClC-type chloride channel; involved in the extreme acid response<ref name='LIB:EcoGene'/> | Voltage-gated ClC-type chloride channel; involved in the extreme acid response<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted voltage-gated chloride channel<ref name='LIB:Riley_2006'/>, B1592<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MriT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ClcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YnfJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted voltage-gated chloride channel<ref name='LIB:Riley_2006'/>, B1592<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MriT<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ClcB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YnfJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:clcB|clcB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:clcB|clcB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=clcB&loc=MG1655:1663339..1664595,W3110:1667029..1668285,DH10B:1754300..1755556,REL606:1642510..1643766 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1642510&end=1643766&gene=clcB&aa=mfhcpfllmhhlhiypdlrtmfhrlliatvvgilaafavagfrhamlllewlflnndsgslvnaatnlspwrrlltpalgglaaglllmgwqkftqqrphaptdymealqtdgqfdyaaslvkslasllvvtsgsaigregamillaalaascfaqrftprqewklwiacgaaagmaaayraplagslfiaevlfgtmmlaslgpviisavvallvsnlinhsdallynvqlsvtvqardyaliistgvlaglcgpllltlmnachrgfvslklappwqlalgglivgllslftpavwgngystvqsfltappllmiiagiflcklcavlassgsgapggvftptlfiglaigmlygrslglwfpdgeeitlllgltgmatllaatthapimstlmicemtgeyqllpglliacviasvisrtlhrdsiyrqhtaqhs Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=clcB+AND+escherichia+coli Pubmed(clcB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=clcB Textpresso(clcB)] | |||
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Revision as of 00:07, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
clcB |
|---|---|
| Gene Synonym(s) |
ECK1587, b1592, JW5263, mriT, ynfJ, yntJ[1] |
| Product Desc. |
YnfJ chloride ion ClC transporter[2][3] Voltage-gated ClC-type chloride channel; involved in the extreme acid response[4] |
| Product Synonyms(s) |
predicted voltage-gated chloride channel[1], B1592[2][1], MriT[2][1], ClcB[2][1], YnfJ[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ClcA and ClcB encode redundant chloride channels. single mutants have no phenotype.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.