cca:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''cca'' | ''cca'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3046, b3056, JW3028''<ref name='LIB:Riley_2006'/> | ''ECK3046, b3056, JW3028''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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tRNA nucleotidyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | tRNA nucleotidyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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tRNA nucleotidyltransferase, repairs terminal CCA of tRNAs<ref name='LIB:EcoGene'/> | tRNA nucleotidyltransferase, repairs terminal CCA of tRNAs<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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fused tRNA nucleotidyl transferase<ref name='LIB:Riley_2006'/>, 2'3'-cyclic phosphodiesterase and 2'nucleotidase and phosphatase<ref name='LIB:Riley_2006'/>, B3056<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cca<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | fused tRNA nucleotidyl transferase<ref name='LIB:Riley_2006'/>, 2'3'-cyclic phosphodiesterase and 2'nucleotidase and phosphatase<ref name='LIB:Riley_2006'/>, B3056<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cca<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:htrG-cca|htrG-cca]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:htrG-cca|htrG-cca]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=cca&loc=MG1655:3199913..3201151,W3110:3200547..3201785,REL606:3134725..3135963,DH10B:3297658..3298896 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3297658&end=3298896&gene=cca&aa=mkiylvggavrdallglpvkdrdwvvvgstpqemldagyqqvgrdfpvflhpqtheeyalarterksgsgytgftcyaapdvtleddlkrrdltinalaqddngeiidpynglgdlqnrllrhvspafgedplrvlrvarfaaryahlgfriadetlalmremthagelehltpervwketesalttrnpqvffqvlrdcgalrvlfpeidalfgvpapakwhpeidtgihtlmtlsmaamlspqvdvrfatlchdlgkgltppelwprhhghgpagvklveqlcqrlrvpneirdlarlvaefhdlihtfpmlnpktivklfdsidawrkpqrveqlaltseadvrgrtgfesadypqgrwlreawevaqsvptkavveagfkgveireeltrrriaavaswkeqrcpkpe Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cca+AND+escherichia+coli Pubmed(cca)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cca Textpresso(cca)] | |||
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Revision as of 00:08, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cca |
|---|---|
| Gene Synonym(s) |
ECK3046, b3056, JW3028[1] |
| Product Desc. |
tRNA nucleotidyltransferase[2][3] tRNA nucleotidyltransferase, repairs terminal CCA of tRNAs[4] |
| Product Synonyms(s) |
fused tRNA nucleotidyl transferase[1], 2'3'-cyclic phosphodiesterase and 2'nucleotidase and phosphatase[1], B3056[2][1], Cca[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The CCA C-terminal HD domain has Ni(2+)-dependent phosphatase activity toward pyrophosphate, canonical 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP. It also has metal-independent phosphodiesterase activity toward 2',3'-cAMP, -cGMP, and -cCMP.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.