bdm:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''bdm'' | ''bdm'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1475, b1481, JW5239, yddX''<ref name='LIB:Riley_2006'/> | ''ECK1475, b1481, JW5239, yddX''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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biofilm-dependent modulation protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | biofilm-dependent modulation protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Osmoresponsive gene with reduced expression in biofilms, function unknown<ref name='LIB:EcoGene'/> | Osmoresponsive gene with reduced expression in biofilms, function unknown<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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biofilm-dependent modulation protein<ref name='LIB:Riley_2006'/>, YddX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Bdm<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1481<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, f92<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | biofilm-dependent modulation protein<ref name='LIB:Riley_2006'/>, YddX<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Bdm<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1481<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, f92<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:bdm-sra|bdm-sra]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:bdm-sra|bdm-sra]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=bdm&loc=MG1655:1554304..1554089,W3110:1557994..1557779,DH10B:1644899..1644684,REL606:1530218..1530003 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1530218&end=1530003&gene=bdm&aa=mcfinlrsvadtintqtrritmftyyqaenstaepalvnaieqglraqhgvvteddilmeltkwveasdndilsdiyqqtinyvvsgqhptl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=bdm+AND+escherichia+coli Pubmed(bdm)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=bdm Textpresso(bdm)] | |||
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Revision as of 00:09, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
bdm |
|---|---|
| Gene Synonym(s) |
ECK1475, b1481, JW5239, yddX[1] |
| Product Desc. |
biofilm-dependent modulation protein[2][3] Osmoresponsive gene with reduced expression in biofilms, function unknown[4] |
| Product Synonyms(s) |
biofilm-dependent modulation protein[1], YddX[2][1], Bdm[2][1], B1481[2][1], f92[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The yddX gene is renamed bdm and the site of the MudX insertion is between the T and the G of the re-annotated ATG start codon, personal communication, Philippe Lejeune, INSA, France, Oct. 1999.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.