araD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''araD'' | ''araD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0062, b0061, JW0060''<ref name='LIB:Riley_2006'/> | ''ECK0062, b0061, JW0060''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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L-ribulose-phosphate 4-epimerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | L-ribulose-phosphate 4-epimerase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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L-ribulose-5-phosphate 4-epimerase<ref name='LIB:EcoGene'/> | L-ribulose-5-phosphate 4-epimerase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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L-ribulose-5-phosphate 4-epimerase<ref name='LIB:Riley_2006'/>, B0061<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AraD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | L-ribulose-5-phosphate 4-epimerase<ref name='LIB:Riley_2006'/>, B0061<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AraD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0008742 L-ribulose-phosphate 4-epimerase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0019324 L-lyxose metabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0019569 L-arabinose catabolic process to xylulose 5-phosphate ([http://www.geneontology.org/GO.evidence.shtml IEP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:araBAD|araBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00302, ara | transcription unit(s): [[:Category:Txn_unit:araBAD|araBAD]]<ref name='LIB:EcoCyc10.6'/>, OP00302, ara | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=araD&loc=MG1655:66550..65855,W3110:66550..65855,REL606:69354..68659 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=69354&end=68659&gene=araD&aa=mledlkrqvleanlalpkhnlvtltwgnvsavdrergvfvikpsgvdysvmtaddmvvvsietgevvegtkkpssdtpthrllyqafpsiggivhthsrhatiwaqagqsipatgtthadyfygtipctrkmtdaeingeyewetgnvivetfekqgidaaqmpgvlvhshgpfawgknaedavhnaivleevaymgifcrqlapqlpdmqqtlldkhylrkhgakayygq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=araD+AND+escherichia+coli Pubmed(araD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=araD Textpresso(araD)] | |||
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Revision as of 00:26, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
araD |
|---|---|
| Gene Synonym(s) |
ECK0062, b0061, JW0060[1] |
| Product Desc. |
L-ribulose-phosphate 4-epimerase[2][3]; Component of L-ribulose-phosphate 4-epimerase[2][3] L-ribulose-5-phosphate 4-epimerase[4] |
| Product Synonyms(s) |
L-ribulose-5-phosphate 4-epimerase[1], B0061[2][1], AraD[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
AraD is a masked class II aldolase.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.