araC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''araC'' | ''araC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0065, b0064, JW0063''<ref name='LIB:Riley_2006'/> | ''ECK0065, b0064, JW0063''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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AraC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | AraC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Transcriptional activator for the ara regulon; autorepressor in the absence of arabinose co-activator<ref name='LIB:EcoGene'/> | Transcriptional activator for the ara regulon; autorepressor in the absence of arabinose co-activator<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B0064<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AraC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulator for ara operon<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B0064<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AraC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulator for ara operon<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0019568 arabinose catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:araC|araC]]<ref name='LIB:EcoCyc10.6'/>, OP00004 | transcription unit(s): [[:Category:Txn_unit:araC|araC]]<ref name='LIB:EcoCyc10.6'/>, OP00004 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=araC&loc=MG1655:70387..71265,W3110:70387..71265,REL606:73191..74069 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=73191&end=74069&gene=araC&aa=maeaqndpllpgysfnahlvagltpieangyldffidrplgmkgyilnltirgqgvvknqgrefvcrpgdillfppgeihhygrhpearewyhqwvyfrpraywhewlnwpsifantgffrpdeahqphfsdlfgqiinagqgegrysellainlleqlllrrmeaineslhppmdnrvreacqyisdhladsnfdiasvaqhvclspsrlshlfrqqlgisvlswredqrisqaklllsttrmpiatvgrnvgfddqlyfsrvfkkctgaspsefragceekvndvavkls Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=araC+AND+escherichia+coli Pubmed(araC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=araC Textpresso(araC)] | |||
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Revision as of 00:11, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
araC |
|---|---|
| Gene Synonym(s) |
ECK0065, b0064, JW0063[1] |
| Product Desc. |
Component of AraC transcriptional dual regulator[2][3] Transcriptional activator for the ara regulon; autorepressor in the absence of arabinose co-activator[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual regulator[1], B0064[2][1], AraC[2][1], transcriptional regulator for ara operon[2][1] |
| Function from GO |
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
AraC activates transcrption for araE and the araBAD and araFGH operons; AraC transcriptional activator family prototype.[4]
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.