amiD:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''amiD''  
''amiD''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0858, b0867, JW0851'', ybjR<ref name='LIB:Riley_2006'/>
''ECK0858, b0867, JW0851'', ybjR<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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predicted amidase and lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
predicted amidase and lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted amidase and lipoprotein<ref name='LIB:Riley_2006'/>, YbjR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0867<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted amidase and lipoprotein<ref name='LIB:Riley_2006'/>, YbjR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0867<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0019867 outer membrane ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0009253 peptidoglycan catabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0009392 N-acetyl-anhydromuramoyl-L-alanine amidase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0008745 N-acetylmuramoyl-L-alanine amidase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0008270 zinc ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): ybjQ
transcription unit(s): ybjQ
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=amiD&loc=MG1655:904136..904966,W3110:905335..906165,REL606:921620..922450 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=921620&end=922450&gene=amiD&aa=mrrffwlvaaalllagcagekgivekegyqldtrrqaqaayprikvlvihytaddfdsslatltdkqvsshylvpavppryngkpriwqlvpeqelawhagisawrgatrlndtsigielenrgwqksagvkyfapfepaqiqaliplakdiiaryhikpenvvahadiapqrkddpgplfpwqqlaqqgigawpdaqrvnfylagraphtpvdtasllellarygydvkpdmtpreqrrvimafqmhfrptlyngeadaetqaiaeallekygqd Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=amiD+AND+escherichia+coli Pubmed(amiD)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=amiD Textpresso(amiD)]


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Revision as of 00:15, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

amiD

Gene Synonym(s)

ECK0858, b0867, JW0851, ybjR[1]

Product Desc.

predicted amidase and lipoprotein[2][3]

Product Synonyms(s)

predicted amidase and lipoprotein[1], YbjR[2][1], B0867[2][1]

Function from GO

Cellular Component

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybjQ

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(amiD)    Textpresso(amiD)

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Notes

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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