alr:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''alr'' | ''alr'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK4045, b4053, JW4013, alr5''<ref name='LIB:Riley_2006'/> | ''ECK4045, b4053, JW4013, alr5''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
Alr<ref name='LIB:EcoCyc10.6'/>; alanine racemase 1, PLP-binding, biosynthetic<ref name='LIB:EcoCyc11.1'/>; | Alr<ref name='LIB:EcoCyc10.6'/>; alanine racemase 1, PLP-binding, biosynthetic<ref name='LIB:EcoCyc11.1'/>; | ||
| Line 43: | Line 43: | ||
Alanine racemase<ref name='LIB:EcoGene'/> | Alanine racemase<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
alanine racemase 1, PLP-binding, biosynthetic<ref name='LIB:Riley_2006'/>, B4053<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Alr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | alanine racemase 1, PLP-binding, biosynthetic<ref name='LIB:Riley_2006'/>, B4053<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Alr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
|| | || | ||
No D-alanine auxotrophy except in the double ΔalrΔdadX mutant. Either Alr or DadX supplies sufficient D-alanine for cell wall biosynthesis. | No D-alanine auxotrophy except in the double ΔalrΔdadX mutant. Either Alr or DadX supplies sufficient D-alanine for cell wall biosynthesis. | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:alr|alr]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:alr|alr]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
low level constitutive | low level constitutive | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=alr&loc=MG1655:4263805..4264884,W3110:4269372..4270451,REL606:4244714..4245793,DH10B:4363501..4364580 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4363501&end=4364580&gene=alr&aa=mqaatvvinrralrhnlqrlrelapaskmvavvkanayghglletartlpdadafgvarleealrlraggitkpvlllegffdardlptisaqhfhtavhneeqlaaleeasldepvtvwmkldtgmhrlgvrpeqaeafyhrltqcknvrqpvnivshfaradepkcgatekqlaifntfcegkpgqrsiaasggillwpqshfdwvrpgiilygvspledrstgadfgcqpvmsltssliavrehkagepvgyggtwvserdtrlgvvamgygdgypraapsgtpvlvngrevpivgrvamdmicvdlgpqaqdkagdpvilwgeglpveriaemtkvsayelitrltsrvamkyvd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=alr+AND+escherichia+coli Pubmed(alr)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=alr Textpresso(alr)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:12, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
alr |
|---|---|
| Gene Synonym(s) |
ECK4045, b4053, JW4013, alr5[1] |
| Product Desc. |
Alr[2]; alanine racemase 1, PLP-binding, biosynthetic[3]; Component of alanine racemase, minor[2] Alanine racemase[4] |
| Product Synonyms(s) |
alanine racemase 1, PLP-binding, biosynthetic[1], B4053[2][1], Alr[2][1] |
| Function from GO | |
| Knock-Out Phenotype |
No D-alanine auxotrophy except in the double ΔalrΔdadX mutant. Either Alr or DadX supplies sufficient D-alanine for cell wall biosynthesis. |
| Regulation/Expression | |
| Regulation/Activity |
low level constitutive |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.