yjgH:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''yjgH''  
''yjgH''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK4242, b4248, JW4206''<ref name='LIB:Riley_2006'/>
''ECK4242, b4248, JW4206''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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hypothetical protein<ref name='LIB:EcoCyc10.6'/>; predicted mRNA endoribonuclease<ref name='LIB:EcoCyc11.1'/>
hypothetical protein<ref name='LIB:EcoCyc10.6'/>; predicted mRNA endoribonuclease<ref name='LIB:EcoCyc11.1'/>
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Function unknown<ref name='LIB:EcoGene'/>
Function unknown<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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predicted mRNA endoribonuclease product<ref name='LIB:Riley_2006'/>, B4248 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjgH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted mRNA endoribonuclease product<ref name='LIB:Riley_2006'/>, B4248 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjgH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yjgH|yjgH]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yjgH|yjgH]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 02:41, 10 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

yjgH

Gene Synonym(s)

ECK4242, b4248, JW4206[1]

Product Desc.

hypothetical protein[2]; predicted mRNA endoribonuclease[3]

Function unknown[4]

Product Synonyms(s)

predicted mRNA endoribonuclease product[1], B4248 product[2][1], YjgH product[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yjgH[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YjgF, RutC, TdcF, YoaB and YjgH are paralogs and members of a highly conserved YjgF family (pfam:PF01042) with diverse mutant phenotypes and unknown molecular function; the family members form homotrimers, some binding 2-ketoglutarate or related compounds. The rat homolog PSP (perchloric acid-soluble protein) has been reported to have endoribonuclease activity, Endoribonuclease L, against ss mRNA, inhibiting translation, but this activity has not been demonstrated for other members.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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