dmlA:Quickview: Difference between revisions
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{| | {| id="T49b02db64c9bf" class=" tableEdit New_Quickview_Table" | ||
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!align=left | !align=left |Standard Name | ||
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''yeaU'' | ''yeaU'' | ||
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!align=left | !align=left |Gene Synonym(s) | ||
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''ECK1798, b1800, JW1789, ttuC''<ref name='LIB:Riley_2006'/> | ''ECK1798, b1800, JW1789, ttuC''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left |Product Desc. | ||
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predicted dehydrogenase<ref name='LIB:EcoCyc10.6'/>; D-malate dehydrogenase (decarboxylating)<ref name='LIB:EcoCyc11.1'/> | predicted dehydrogenase<ref name='LIB:EcoCyc10.6'/>; D-malate dehydrogenase (decarboxylating)<ref name='LIB:EcoCyc11.1'/> | ||
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D-malate oxidase, NAD-dependent; probable tartrate dehydrogenase<ref name='LIB:EcoGene'/> | D-malate oxidase, NAD-dependent; probable tartrate dehydrogenase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left |Product Synonyms(s) | ||
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predicted dehydrogenase<ref name='LIB:Riley_2006'/>, B1800<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YeaU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TtuC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted dehydrogenase<ref name='LIB:Riley_2006'/>, B1800<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YeaU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TtuC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left |Knock-Out Phenotype | ||
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!align=left | !align=left |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:yeaU|yeaU]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yeaU|yeaU]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left |Regulation/Activity | ||
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Revision as of 01:53, 10 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yeaU |
|---|---|
| Gene Synonym(s) |
ECK1798, b1800, JW1789, ttuC[1] |
| Product Desc. |
predicted dehydrogenase[2]; D-malate dehydrogenase (decarboxylating)[3] D-malate oxidase, NAD-dependent; probable tartrate dehydrogenase[4] |
| Product Synonyms(s) |
predicted dehydrogenase[1], B1800[2][1], YeaU[2][1], TtuC[2][1] |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity |
|
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Notes
AFMB Structural Genomics target No. 39 (http://afmb.cnrs-mrs.fr/article171.html). YeaU is 77% identical to a characterized tartrate dehydrogenase from Pseudomonas putida (SP:Q51945); this P. putida enzyme also has D-malate oxidase activity (Karsten, 2002). The D-malate oxidase activity of YeaU has been confirmed (Reed, 2006), but the probable tartrate dehydrogenase activity has not been tested. Mutations in yeaT or yeaU block growth on D-malate (Reed, 2006). After four hours of Zn(II) stress, protein levels increased (Easton, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.