tbpA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''tbpA''  
''tbpA''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK0069, b0068, JW0067, sfuA, thiB, yabL''<ref name='LIB:Riley_2006'/>
''ECK0069, b0068, JW0067, sfuA, thiB, yabL''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Periplasmic thiamin binding protein; monomeric<ref name='LIB:EcoGene'/>
Periplasmic thiamin binding protein; monomeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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thiamin transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B0068<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YabL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TbpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
thiamin transporter subunit<ref name='LIB:Riley_2006'/>, periplasmic-binding component of ABC superfamily<ref name='LIB:Riley_2006'/>, B0068<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YabL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SfuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TbpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:thiQ|thiQ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:thiQ|thiQ]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 00:52, 10 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

tbpA

Gene Synonym(s)

ECK0069, b0068, JW0067, sfuA, thiB, yabL[1]

Product Desc.

SfuA[2][3];

Component of thiamin ABC transporter[2][3]

Periplasmic thiamin binding protein; monomeric[4]

Product Synonyms(s)

thiamin transporter subunit[1], periplasmic-binding component of ABC superfamily[1], B0068[2][1], YabL[2][1], SfuA[2][1], ThiB[2][1], TbpA[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): thiQ[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


tbpA-thiPQ operon expression is controlled by a thiamine pyrophosphate (TPP) responsive riboswitch in the 5' UTR. This THI element has been reported in intergenic sRNA searches as sroA/tpe79. The tbpA riboswitch is the target for the antibiotic pyrithiamine. The corrected U00096.2 sequence revises the sequence of the TbpA signal peptide, previous thought to be 14 aa.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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