soxS:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''soxS''  
''soxS''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK4054, b4062, JW4023''<ref name='LIB:Riley_2006'/>
''ECK4054, b4062, JW4023''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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SoxS transcriptional activator<ref name='LIB:EcoCyc10.6'/>; SoxS transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/>
SoxS transcriptional activator<ref name='LIB:EcoCyc10.6'/>; SoxS transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/>
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Global transcription regulator for superoxide response; AraC family<ref name='LIB:EcoGene'/>
Global transcription regulator for superoxide response; AraC family<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B4062<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SoxS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulation of superoxide response regulon<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, B4062<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SoxS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulation of superoxide response regulon<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:soxS|soxS]]<ref name='LIB:EcoCyc10.6'/>, OP00296  
transcription unit(s): [[:Category:Txn_unit:soxS|soxS]]<ref name='LIB:EcoCyc10.6'/>, OP00296  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 00:45, 10 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

soxS

Gene Synonym(s)

ECK4054, b4062, JW4023[1]

Product Desc.

SoxS transcriptional activator[2]; SoxS transcriptional dual regulator[3]

Global transcription regulator for superoxide response; AraC family[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator[1], B4062[2][1], SoxS[2][1], regulation of superoxide response regulon[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): soxS[2], OP00296

Regulation/Activity


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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Induces sox regulon when superoxide levels increase. Induced during biofilm formation. SoxS is unstable except in a lon ftsH double mutant. This unstability is suggested to play a role in the rapid return of the regulon's gene expression to preinduced levels.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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