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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''phnD''  
''phnD''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK4098, b4105, JW4066, psiD, phn''<ref name='LIB:Riley_2006'/>
''ECK4098, b4105, JW4066, psiD, phn''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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PhnD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
PhnD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Phosphonate uptake, periplasmic binding protein; ABC transporter<ref name='LIB:EcoGene'/>
Phosphonate uptake, periplasmic binding protein; ABC transporter<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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phosphonate/organophosphate ester transporter subunit product<ref name='LIB:Riley_2006'/>, periplasmic binding component of ABC superfamily product<ref name='LIB:Riley_2006'/>, B4105 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Phn product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PsiD product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PhnD product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
phosphonate/organophosphate ester transporter subunit product<ref name='LIB:Riley_2006'/>, periplasmic binding component of ABC superfamily product<ref name='LIB:Riley_2006'/>, B4105 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Phn product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PsiD product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PhnD product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:phnCDEEFGHIJKLMNOP|phnCDEEFGHIJKLMNOP]]<ref name='LIB:EcoCyc10.6'/>, OP00283, phnCDE-w4011-phnFGHIJKLMNOP, phnCDE-w4011-phnFGHIJKLMNOPQ, phnCDE-b4103-phnFGHIJKLMNOP  
transcription unit(s): [[:Category:Txn_unit:phnCDEEFGHIJKLMNOP|phnCDEEFGHIJKLMNOP]]<ref name='LIB:EcoCyc10.6'/>, OP00283, phnCDE-w4011-phnFGHIJKLMNOP, phnCDE-w4011-phnFGHIJKLMNOPQ, phnCDE-b4103-phnFGHIJKLMNOP  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 03:33, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

phnD

Gene Synonym(s)

ECK4098, b4105, JW4066, psiD, phn[1]

Product Desc.

PhnD[2][3];

Component of alkylphosphonate ABC transporter[2][3]

Phosphonate uptake, periplasmic binding protein; ABC transporter[4]

Product Synonyms(s)

phosphonate/organophosphate ester transporter subunit product[1], periplasmic binding component of ABC superfamily product[1], B4105 product[2][1], Phn product[2][1], PsiD product[2][1], PhnD product[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): phnCDEEFGHIJKLMNOP[2], OP00283, phnCDE-w4011-phnFGHIJKLMNOP, phnCDE-w4011-phnFGHIJKLMNOPQ, phnCDE-b4103-phnFGHIJKLMNOP

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Phosphonate utilization is cryptic in K-12. PhnD binds 2-aminoethylphosphonate and other phosphonates. First 26 aa are predicted to be a type I signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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