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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''hpf''  
''hpf''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''yhbH, ECK3192, b3203, JW3170, rp5M''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''yhbH, ECK3192, b3203, JW3170, rp5M''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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probable sigma-54 modulation protein<ref name='LIB:EcoCyc10.6'/>; predicted ribosome-associated, sigma 54 modulation protein<ref name='LIB:EcoCyc11.1'/>
probable sigma-54 modulation protein<ref name='LIB:EcoCyc10.6'/>; predicted ribosome-associated, sigma 54 modulation protein<ref name='LIB:EcoCyc11.1'/>
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Ribosome hibernation promoting factor HPF; stabilizes 70S dimers (100S); induced in stationary phase; raiA paralog has opposite effect on 70S dimers<ref name='LIB:EcoGene'/>
Ribosome hibernation promoting factor HPF; stabilizes 70S dimers (100S); induced in stationary phase; raiA paralog has opposite effect on 70S dimers<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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predicted ribosome-associated, sigma 54 modulation protein<ref name='LIB:Riley_2006'/>, B3203<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Hpf<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>  
predicted ribosome-associated, sigma 54 modulation protein<ref name='LIB:Riley_2006'/>, B3203<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Hpf<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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Non-essential <ref name=PMID:17277072/>
Non-essential <ref name=PMID:17277072/>
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:lptB-rpoN-yhbH-ptsN-yhbJ|lptB-rpoN-yhbH-ptsN-yhbJ]]<ref name='LIB:EcoCyc10.6'/>, yhbG-rpoN-yhbH-ptsN-yhbJ, [[:Category:Txn_unit:rpoN-yhbH-ptsN-yhbJ-npr|rpoN-yhbH-ptsN-yhbJ-npr]]<ref name='LIB:EcoCyc10.6'/>, rpoN-ORFII-ORF-III-ORF-IV-ORFV, rpoN-yhbH-ptsN-yhbJ-ptsO  
transcription unit(s): [[:Category:Txn_unit:lptB-rpoN-yhbH-ptsN-yhbJ|lptB-rpoN-yhbH-ptsN-yhbJ]]<ref name='LIB:EcoCyc10.6'/>, yhbG-rpoN-yhbH-ptsN-yhbJ, [[:Category:Txn_unit:rpoN-yhbH-ptsN-yhbJ-npr|rpoN-yhbH-ptsN-yhbJ-npr]]<ref name='LIB:EcoCyc10.6'/>, rpoN-ORFII-ORF-III-ORF-IV-ORFV, rpoN-yhbH-ptsN-yhbJ-ptsO  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 01:38, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

hpf

Gene Synonym(s)

yhbH, ECK3192, b3203, JW3170, rp5M[1][2]

Product Desc.

probable sigma-54 modulation protein[3]; predicted ribosome-associated, sigma 54 modulation protein[2]

Ribosome hibernation promoting factor HPF; stabilizes 70S dimers (100S); induced in stationary phase; raiA paralog has opposite effect on 70S dimers[4]

Product Synonyms(s)

predicted ribosome-associated, sigma 54 modulation protein[1], B3203[3][1], YhbH[3][1], Hpf[2][1]

Knock-Out Phenotype

Non-essential [5]

Regulation/Expression

transcription unit(s): lptB-rpoN-yhbH-ptsN-yhbJ[3], yhbG-rpoN-yhbH-ptsN-yhbJ, rpoN-yhbH-ptsN-yhbJ-npr[3], rpoN-ORFII-ORF-III-ORF-IV-ORFV, rpoN-yhbH-ptsN-yhbJ-ptsO

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Homologous to RpoN modulators. Induced by AI-2 pheromone. The rpoN operon contains rpoN-hpf-ptsN-yhbJ-npr.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Bubunenko, M et al. (2007) Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli. J. Bacteriol. 189 2844-53 PubMed
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