hcaD:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''hcaD''  
''hcaD''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK2539, b2542, JW2526, hcaA4, yfhY, phdA''<ref name='LIB:Riley_2006'/>
''ECK2539, b2542, JW2526, hcaA4, yfhY, phdA''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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HCAD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
HCAD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin reductase subunit; hca genes catabolize 3-phenylpropionate and cinnamic acid, feeding the products into the the mhp pathway<ref name='LIB:EcoGene'/>
3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin reductase subunit; hca genes catabolize 3-phenylpropionate and cinnamic acid, feeding the products into the the mhp pathway<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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phenylpropionate dioxygenase, ferredoxin reductase subunit<ref name='LIB:Riley_2006'/>, B2542<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfhY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PhdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
phenylpropionate dioxygenase, ferredoxin reductase subunit<ref name='LIB:Riley_2006'/>, B2542<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfhY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PhdA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HcaD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hcaEFCBD|hcaEFCBD]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hcaEFCBD|hcaEFCBD]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 01:31, 9 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

hcaD

Gene Synonym(s)

ECK2539, b2542, JW2526, hcaA4, yfhY, phdA[1]

Product Desc.

HCAD[2][3];

Component of 3-phenylpropionate dioxygenase system[2][3]

3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin reductase subunit; hca genes catabolize 3-phenylpropionate and cinnamic acid, feeding the products into the the mhp pathway[4]

Product Synonyms(s)

phenylpropionate dioxygenase, ferredoxin reductase subunit[1], B2542[2][1], YfhY[2][1], PhdA[2][1], HcaD[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hcaEFCBD[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Hydrocinnamic acid is a synonym for 3-phenylpropionic acid.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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