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===Notes===
===Notes===
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Mg(2+) stimulon-PhoPQ regulon, EvgAS-PhoPQ cascade enhanced-expression subset. The  phoP-activation phenotype (PagP) was initially characterized in Salmonella then confirmed in E. coli (Jia, 2004). SignalP-NN incorrectly predicts a 27 aa signal peptide, but the verified cleavage site after 25 aa is predicted as a second possible cleavage site by SignalP-NN and as the only cleavage site by the more recent SignalP-HMM predictor (see SignalP button below).<ref name='LIB:EcoGene'/>





Revision as of 01:57, 3 March 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Gene Name

pagP (synonyms: crcA, ECK0615, b0622, JW0617, ybeG)[1][2]

Product(s)

CrcA product[1]: palmitoyl transferase for Lipid A product, B0622 product, YbeG product, PagP product

Description

PagP monomer[2][3]

Component of palmitoyl transferase for Lipid A[3]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pagP[2], crcA

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Mg(2+) stimulon-PhoPQ regulon, EvgAS-PhoPQ cascade enhanced-expression subset. The phoP-activation phenotype (PagP) was initially characterized in Salmonella then confirmed in E. coli (Jia, 2004). SignalP-NN incorrectly predicts a 27 aa signal peptide, but the verified cleavage site after 25 aa is predicted as a second possible cleavage site by SignalP-NN and as the only cleavage site by the more recent SignalP-HMM predictor (see SignalP button below).[4]



References

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  1. ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.