rpiA:Expression: Difference between revisions

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GFP Fusion
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Intergenic region (3057251..3057418) fused to <i>gfpmut2</i>.
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[http://www.openbiosystems.com/GeneExpression/Non-Mammalian/Bacteria/EcoliPromoters/ OpenBioSystems][[Category:Genes in OpenBioSystems with Promoter Fusions]]
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Raw protomer fusion data from Zaslaver, <i>et al.</i><br />Plate:109-AZ01; Well:H3<ref name="PMID:16862137" />
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Revision as of 21:32, 9 September 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Overview Transcription Translation Turnover Experimental Links References Suggestions

Overview

This is a placeholder for a summary statement on how expression of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Transcription and Transcriptional Regulation

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Transcription unit(s)

rpiA

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Figure courtesy of RegulonDB

See Help:Expression_transcription for help entering or editing information in this section of EcoliWiki.

Notes

This is a placeholder for a summary statement about how transcription of this gene is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Translation and Regulation of Translation

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gbrowse_img.php?coord=3057327..3057367&genome=ecoli&name=MG1655&trackset=Genes_unlabeled+DNA_unlabeled+flip&width=400&.png
This picture shows the sequence around the N-terminus.

Notes

This is a placeholder for a summary statement about how translation of this gene product is regulated. You can help EcoliWiki by becoming a user and writing/editing this statement.

Turnover and Regulation of Turnover

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Notes

This is a placeholder for a summary statement about turnover of this gene product. You can help EcoliWiki by becoming a user and writing/editing this statement.

Experimental

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Mutations Affecting Expression

Allele Name Mutation Phenotype Reference
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See Help:Expression_mutations for help entering or editing information in this section of EcoliWiki.

Expression Studies

Type Reference Notes

microarray

EcoliGenExpDB:b2914 (EcoliWiki Page)

Summary of data for rpiA from multiple microarray studies

microarray

GEO Profiles:b2914 (EcoliWiki Page)

NCBI GEO profiles for rpiA

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See Help:Expression_studies for help entering or editing information in this section of EcoliWiki.

Expression Resources

Resource Name Resource Type Description Source Notes

plasmid

rpiA promoter fragment cloned into pKO500, which is a galK expression vector

[1]

GFP Fusion

Intergenic region (3057251..3057418) fused to gfpmut2.

OpenBioSystems

Raw protomer fusion data from Zaslaver, et al.
Plate:109-AZ01; Well:H3[2]

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Notes

Accessions Related to rpiA Expression

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11443

EchoBASE (EcoliWiki Page)

EchoBASE:EB1413

EcoliGenExpDB (EcoliWiki Page)

EcoliGenExpDB:b2914

EcoGene (EcoliWiki Page)

EcoGene:EG11443

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See Help:Expression_accessions for help entering or editing information in this section of EcoliWiki.

Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Hove-Jensen, B & Maigaard, M (1993) Escherichia coli rpiA gene encoding ribose phosphate isomerase A. J. Bacteriol. 175 5628-35 PubMed
  2. ↑ Zaslaver, A et al. (2006) A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat. Methods 3 623-8 PubMed


Categories

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