rppH:Quickview: Difference between revisions
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!{{table_heading_style}} |Gene Name | !align=left {{table_heading_style}} |Gene Name | ||
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[[nudH:Gene|''nudH]]'' (synonyms: ''ECK2826, b2830, JW2798, ydgP, ygdP'')<ref name='LIB:Riley_2006'/> | [[nudH:Gene|''nudH]]'' (synonyms: ''ECK2826, b2830, JW2798, ydgP, ygdP'')<ref name='LIB:Riley_2006'/> | ||
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''rppH'' <ref name='PMID:18202662'/> | ''rppH'' <ref name='PMID:18202662'/> | ||
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!{{table_heading_style}} |Product(s) | !align=left {{table_heading_style}} |Product(s) | ||
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[[nudH:Gene_Product(s)|NudH product]]<ref name='LIB:Riley_2006'/>: nucleotide hydrolase product, B2830 product, YgdP product | [[nudH:Gene_Product(s)|NudH product]]<ref name='LIB:Riley_2006'/>: nucleotide hydrolase product, B2830 product, YgdP product | ||
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RNA pyrophophohydrolase | RNA pyrophophohydrolase | ||
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!{{table_heading_style}} |Description | !align=left {{table_heading_style}} |Description | ||
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putative invasion protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | putative invasion protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Removes 5'-pyrophosphate from mRNAs and initiates degradation by the 5'-end dependent pathway. <ref name='PMID:18202662'/> | Removes 5'-pyrophosphate from mRNAs and initiates degradation by the 5'-end dependent pathway. <ref name='PMID:18202662'/> | ||
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!{{table_heading_style}} |Knock-Out Phenotype | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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Many mRNAs have increased | Many mRNAs have increased half-lives. <ref name='PMID:18202662'/> | ||
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!{{table_heading_style}} |Regulation/Expression | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:ptsP|ptsP]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ptsP|ptsP]]<ref name='LIB:EcoCyc10.6'/> | ||
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!{{table_heading_style}} |Regulation/Activity | !align=left {{table_heading_style}} |Regulation/Activity | ||
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Revision as of 19:08, 31 July 2008
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Gene Name |
rppH [2] | |
|---|---|---|
| Product(s) |
NudH product[1]: nucleotide hydrolase product, B2830 product, YgdP product |
RNA pyrophophohydrolase |
| Description |
Removes 5'-pyrophosphate from mRNAs and initiates degradation by the 5'-end dependent pathway. [2] | |
| Knock-Out Phenotype |
Many mRNAs have increased half-lives. [2] | |
| Regulation/Expression | ||
| Regulation/Activity |
| |
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Notes
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 Deana, A et al. (2008) The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal. Nature 451 355-8 PubMed
- ↑ 3.0 3.1 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7