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*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/ BLAST]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://130.14.29.110/BLAST/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=%28none%29&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&SHOW_LINKOUT=yes&GET_SEQUENCE=yes&SEARCH_NAME=psi_bp/ CDD]
*[http://inparanoid.sbc.su.se/cgi-bin/eid_search.pl?id=NP_418544&idtype=all&start=on&species=All&conf=0.05 InParanoid]
*[http://inparanoid.sbc.su.se/cgi-bin/gene_search.cgi?id=NP_418544&idtype=all&all_or_selection=all&specieslist=1&scorelimit=0.05&.submit=Submit&.cgifields=specieslist&.cgifields=idtype&.cgifields=all_or_selection InParanoid]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]
*[http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/ YOGY]


Revision as of 06:54, 14 November 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000016114 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000023694 (score: 0.211)
  • YP_026275 (score: 0.201)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000017353 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000002635 (score: 0.297)
  • YP_026275 (score: 0.085)

From Inparanoid:20070104

Caenorhabditis briggsae

  • YP_026275 (score: 0.120)
  • WBGene00034984 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • YP_026275 (score: 0.120)
  • WBGene00017530 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000005874 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000004495 (score: 0.332)
  • YP_026275 (score: 0.059)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041114-166 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041114-166 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040801-97 (score: 0.609)
  • ZDB-GENE-040801-89 (score: 0.609)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000030944 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000006158 (score: 0.441)
  • YP_026275 (score: 0.097)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000348883 (score: 1.000; bootstrap: 100%)
  • ENSP00000317072 (score: 0.344)
  • YP_026275 (score: 0.084)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000013959 (score: 1.000; bootstrap: 100%)
  • YP_026275 (score: 0.115)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008544 (score: 1.000; bootstrap: 100%)
  • YP_026275 (score: 0.111)

From Inparanoid:20070104

Mus musculus

  • MGI:1923824 (score: 1.000; bootstrap: 100%)
  • MGI:3583946 (score: 1.000; bootstrap: 100%)
  • YP_026275 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • YP_026275 (score: 0.195)
  • Q6ZL90 (score: 1.000; bootstrap: 100%)
  • Q8S7U2 (score: 0.603)
  • Q67VV0 (score: 0.073)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000043351 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000020107 (score: 0.127)
  • YP_026275 (score: 0.088)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000019080 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000042476 (score: 0.318)
  • YP_026275 (score: 0.081)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145032 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000149739 (score: 0.479)
  • NEWSINFRUP00000161355 (score: 0.397)
  • YP_026275 (score: 0.057)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00017558001 (score: 1.000; bootstrap: 100%)
  • GSTENP00005513001 (score: 1.000; bootstrap: 100%)
  • GSTENP00023508001 (score: 0.178)
  • GSTENP00018375001 (score: 0.064)
  • YP_026275 (score: 0.114)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000002564 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000039480 (score: 0.457)
  • YP_026275 (score: 0.070)

From Inparanoid:20070104

Shigella flexneri

MELB

From SHIGELLACYC

E. coli O157

MELB

From ECOO157CYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Organism Homologs (Statistics) Comments

Apis mellifera

  • ENSAPMP00000016114 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000023694 (score: 0.211)
  • YP_026275 (score: 0.201)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000017353 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000002635 (score: 0.297)
  • YP_026275 (score: 0.085)

From Inparanoid:20070104

Caenorhabditis briggsae

  • YP_026275 (score: 0.120)
  • WBGene00034984 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • YP_026275 (score: 0.120)
  • WBGene00017530 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000005874 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000004495 (score: 0.332)
  • YP_026275 (score: 0.059)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041114-166 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041114-166 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040801-97 (score: 0.609)
  • ZDB-GENE-040801-89 (score: 0.609)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000030944 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000006158 (score: 0.441)
  • YP_026275 (score: 0.097)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000348883 (score: 1.000; bootstrap: 100%)
  • ENSP00000317072 (score: 0.344)
  • YP_026275 (score: 0.084)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000013959 (score: 1.000; bootstrap: 100%)
  • YP_026275 (score: 0.115)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008544 (score: 1.000; bootstrap: 100%)
  • YP_026275 (score: 0.111)

From Inparanoid:20070104

Mus musculus

  • MGI:1923824 (score: 1.000; bootstrap: 100%)
  • MGI:3583946 (score: 1.000; bootstrap: 100%)
  • YP_026275 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • YP_026275 (score: 0.195)
  • Q6ZL90 (score: 1.000; bootstrap: 100%)
  • Q8S7U2 (score: 0.603)
  • Q67VV0 (score: 0.073)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000043351 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000020107 (score: 0.127)
  • YP_026275 (score: 0.088)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000019080 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000042476 (score: 0.318)
  • YP_026275 (score: 0.081)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000145032 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000149739 (score: 0.479)
  • NEWSINFRUP00000161355 (score: 0.397)
  • YP_026275 (score: 0.057)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00017558001 (score: 1.000; bootstrap: 100%)
  • GSTENP00005513001 (score: 1.000; bootstrap: 100%)
  • GSTENP00023508001 (score: 0.178)
  • GSTENP00018375001 (score: 0.064)
  • YP_026275 (score: 0.114)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000002564 (score: 1.000; bootstrap: 100%)
  • ENSXETP00000039480 (score: 0.457)
  • YP_026275 (score: 0.070)

From Inparanoid:20070104

Shigella flexneri

MELB

From SHIGELLACYC

E. coli O157

MELB

From ECOO157CYC

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

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Name URL Comments
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References

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Categories

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