EchoBASE: Difference between revisions
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=About {{PAGENAME}}= | =About {{PAGENAME}}= | ||
[http://ecoli-york.org {{PAGENAME}}] | [http://ecoli-york.org {{PAGENAME}}] curates experimental and bioinformatic information about E. coli genes and their gene products. The aim of this database is to provide information that will lead to functional predictions for gene products of unknown function. ''Echo''BASE is part of the [http://www.uni-giessen.de/~gx1052/IECA/ieca.html International ''E. coli'' Alliance]. | ||
=Content= | =Content= | ||
=Using {{PAGENAME}}= | =Using {{PAGENAME}}= | ||
As of July 11, 2006, there are 303 curated references in EchoBASE. The database contains descriptions of papers with information on the function of individual gene products, as well as the actual data from larger, post-genomic studies, which can be searched and manipulated. There are 106 curated experiments which can be browsed by type: Biochemistry (10), Bioinformatics (11), Genetics (13), Microarray (6), Protein-Protein Interaction (3), Proteomics (15), Structure (46), and Transcript Level (2). | |||
==Browsing== | ==Browsing== | ||
==Searching== | ==Searching== | ||
==Usage examples== | ==Usage examples== | ||
''Add links to additional pages describing success stories here.'' | ''Add links to additional pages describing success stories here.'' | ||
=Other sites with related content= | =Other sites with related content= | ||
=Technology= | =Technology= | ||
==Web Services/API== | ==Web Services/API== | ||
=Discussion= | =Discussion= | ||
==Trackbacks== | ==Trackbacks== | ||
''This feature is not yet functional'' | ''This feature is not yet functional'' | ||
Revision as of 02:28, 11 July 2006
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| EchoBASE | |
| Who: | Raju Misra, Richard Horler, and Gavin Thomas |
| What: | xx |
| Where: | EchoBASE (www.ecoli-york.org) |
| Updates | |
| Upcoming events | link to event calendar, if applicable |
| Web Services | |
About EchoBASE
EchoBASE curates experimental and bioinformatic information about E. coli genes and their gene products. The aim of this database is to provide information that will lead to functional predictions for gene products of unknown function. EchoBASE is part of the International E. coli Alliance.
Content
Using EchoBASE
As of July 11, 2006, there are 303 curated references in EchoBASE. The database contains descriptions of papers with information on the function of individual gene products, as well as the actual data from larger, post-genomic studies, which can be searched and manipulated. There are 106 curated experiments which can be browsed by type: Biochemistry (10), Bioinformatics (11), Genetics (13), Microarray (6), Protein-Protein Interaction (3), Proteomics (15), Structure (46), and Transcript Level (2).
Browsing
Searching
Usage examples
Add links to additional pages describing success stories here.
Technology
Web Services/API
Discussion
Trackbacks
This feature is not yet functional
- $4$5: [$2 $1]
References
Thomas, G.H. (1999) Completing the E. coli proteome: a database of gene products characterised since completion of the genome sequence. Bioinformatics 15:860-861.
Misra, R.V. et al. (2005) EchoBASE: an integrated post-genomic database for Escherichia coli. Nucleic Acids Res. 33(Database issue):D329-33