ybhL:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
imported>WikiEntryBot
Automated import of articles
imported>WikiEntryBot
Automated import of articles
Line 23: Line 23:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.O46abadef4404c-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.O46abadef4404c-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='208252'  
{|class = 'sortable' {{Prettytable}} id='208252'  
|- {{table heading style}}
|- {{table heading style}}
Line 227: Line 232:
|
|
From SHIGELLACYC  
From SHIGELLACYC  
|-
|
''E. coli'' O157
|
YBHL
|
From ECOO157CYC
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.45537.O46abadef4404c&page=45537&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45537.O46abadef4404c&page=45537&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.O46abadef4404c-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.O46abadef4404c-->
Line 246: Line 258:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.H46abae0f1de3b-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.H46abae0f1de3b-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='208253'  
{|class = 'sortable' {{Prettytable}} id='208253'  
|- {{table_heading_style}}
|- {{table_heading_style}}
Line 258: Line 275:
   
   
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.45537.H46abae0f1de3b&page=45537&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45537.H46abae0f1de3b&page=45537&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.H46abae0f1de3b-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.H46abae0f1de3b-->
Line 269: Line 286:
{{BacktoTop}}
{{BacktoTop}}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.Y46a7fba18d408-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.Y46a7fba18d408-->
<!--*** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. *** -->
<!--
******************************************************************************************
*
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
*
****************************************************************************************** -->
{|class = 'sortable' {{Prettytable}} id='109533'  
{|class = 'sortable' {{Prettytable}} id='109533'  
|- {{table_heading_style}}
|- {{table_heading_style}}
!Name!!URL!!Comments
!Name!!URL!!Comments
|-class='sortbottom'
|-class='sortbottom'
|[{{SERVER}}/colipedia/index.php/Special:TableEdit?id=421aa90e079fa326b6494f812ad13e79.45537.Y46a7fba18d408&page=45537&pagename={{FULLPAGENAMEE}} edit table] || ||
|[{{SERVER}}/colipedia/index.php?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79.45537.Y46a7fba18d408&page=45537&pagename={{FULLPAGENAMEE}} edit table] || ||
|}
|}
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.Y46a7fba18d408-->
<!--box uid=421aa90e079fa326b6494f812ad13e79.45537.Y46a7fba18d408-->
Line 285: Line 307:
<noinclude>
<noinclude>
__NOTOC__
__NOTOC__
[[Category:Genes with homologs in Anopheles gambiae ]][[Category:Genes with homologs in Apis mellifera ]][[Category:Genes with homologs in Arabidopsis thaliana ]][[Category:Genes with homologs in Bos taurus ]][[Category:Genes with homologs in Caenorhabditis briggsae ]][[Category:Genes with homologs in Caenorhabditis elegans ]][[Category:Genes with homologs in Canis familiaris ]][[Category:Genes with homologs in Ciona intestinalis ]][[Category:Genes with homologs in Danio rerio ]][[Category:Genes with homologs in Drosophila melanogaster ]][[Category:Genes with homologs in Gallus gallus ]][[Category:Genes with homologs in Homo sapiens ]][[Category:Genes with homologs in Macaca mulatta ]][[Category:Genes with homologs in Monodelphis domestica ]][[Category:Genes with homologs in Mus musculus ]][[Category:Genes with homologs in Pan troglodytes ]][[Category:Genes with homologs in Rattus norvegicus ]][[Category:Genes with homologs in Schizosaccharomyces pombe ]][[Category:Genes with homologs in Takifugu rubripes ]][[Category:Genes with homologs in Tetraodon nigroviridis ]][[Category:Genes with homologs in Shigella flexneri ]][[Category:Genes with homologs in E. coli O157]]</noinclude>
</noinclude>
===Categories===
{{BacktoTop}}
[[Category:Genes with homologs in Anopheles gambiae ]]
[[Category:Genes with homologs in Apis mellifera ]]
[[Category:Genes with homologs in Arabidopsis thaliana ]]
[[Category:Genes with homologs in Bos taurus ]]
[[Category:Genes with homologs in Caenorhabditis briggsae ]]
[[Category:Genes with homologs in Caenorhabditis elegans ]]
[[Category:Genes with homologs in Canis familiaris ]]
[[Category:Genes with homologs in Ciona intestinalis ]]
[[Category:Genes with homologs in Danio rerio ]]
[[Category:Genes with homologs in Drosophila melanogaster ]]
[[Category:Genes with homologs in Gallus gallus ]]
[[Category:Genes with homologs in Homo sapiens ]]
[[Category:Genes with homologs in Macaca mulatta ]]
[[Category:Genes with homologs in Monodelphis domestica ]]
[[Category:Genes with homologs in Mus musculus ]]
[[Category:Genes with homologs in Pan troglodytes ]]
[[Category:Genes with homologs in Rattus norvegicus ]]
[[Category:Genes with homologs in Schizosaccharomyces pombe ]]
[[Category:Genes with homologs in Takifugu rubripes ]]
[[Category:Genes with homologs in Tetraodon nigroviridis ]]
[[Category:Genes with homologs in Shigella flexneri ]]
[[Category:Genes with homologs in E. coli O157]]

Revision as of 11:49, 2 August 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000027407 (score: 1.000; bootstrap: 100%)
  • ENSANGP00000025350 (score: 0.433)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000004984 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT4G15470 (score: 1.000; bootstrap: 100%)
  • AT1G03070 (score: 0.446)
  • AT3G63310 (score: 0.430)
  • AT4G02690 (score: 0.421)
  • AT4G14730 (score: 0.400)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000008243 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000000405 (score: 0.118)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00038589 (score: 1.000; bootstrap: 100%)
  • WBGene00035792 (score: 0.472)
  • WBGene00038588 (score: 0.374)
  • WBGene00027502 (score: 0.230)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00019664 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000000526 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000002091 (score: 0.093)
  • ENSCAFP00000002899 (score: 0.077)
  • ENSCAFP00000021584 (score: 0.059)
  • ENSCAFP00000012315 (score: 0.059)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000014392 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2152 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3099 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050320-88 (score: 0.144)
  • ZDB-GENE-050320-88 (score: 0.144)
  • ZDB-CDNA-040425-2301 (score: 0.136)
  • ZDB-GENE-040426-1367 (score: 0.136)
  • ZDB-CDNA-041010-69 (score: 0.118)
  • ZDB-GENE-041010-69 (score: 0.118)
  • ZDB-GENE-041010-18 (score: 0.100)
  • ZDB-CDNA-050522-465 (score: 0.092)
  • ZDB-GENE-050522-465 (score: 0.092)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0050379 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000016042 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000016657 (score: 0.075)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000286424 (score: 1.000; bootstrap: 100%)
  • ENSP00000314380 (score: 0.081)
  • ENSP00000258412 (score: 0.064)
  • ENSP00000321951 (score: 0.059)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000021857 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000000606 (score: 0.079)
  • ENSMMUP00000030179 (score: 0.068)
  • ENSMMUP00000030044 (score: 0.057)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000011352 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000013045 (score: 0.164)
  • ENSMODP00000005294 (score: 0.113)
  • ENSMODP00000019347 (score: 0.063)

From Inparanoid:20070104

Mus musculus

  • MGI:1915462 (score: 1.000; bootstrap: 100%)
  • MGI:1913418 (score: 0.138)
  • MGI:1922305 (score: 0.105)
  • MGI:1919643 (score: 0.100)
  • MGI:1916910 (score: 0.077)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000008813 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000042113 (score: 0.096)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000005694 (score: 1.000; bootstrap: 81%)
  • ENSRNOP00000045014 (score: 0.112)
  • ENSRNOP00000039775 (score: 0.094)
  • ENSRNOP00000011377 (score: 0.089)
  • ENSRNOP00000019848 (score: 0.066)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC5764 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000158755 (score: 1.000; bootstrap: 56%)
  • NEWSINFRUP00000134230 (score: 0.466)
  • NEWSINFRUP00000137810 (score: 0.457)
  • NEWSINFRUP00000163334 (score: 0.420)
  • NEWSINFRUP00000162561 (score: 0.403)
  • NEWSINFRUP00000145259 (score: 0.355)
  • NEWSINFRUP00000158446 (score: 0.184)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00028054001 (score: 1.000; bootstrap: 100%)
  • GSTENP00034101001 (score: 1.000; bootstrap: 100%)
  • GSTENP00027225001 (score: 0.518)
  • GSTENP00020761001 (score: 0.470)
  • GSTENP00015091001 (score: 0.456)
  • GSTENP00017408001 (score: 0.122)

From Inparanoid:20070104

Shigella flexneri

YBHL

From SHIGELLACYC

E. coli O157

YBHL

From ECOO157CYC

edit table

See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Do-It-Yourself Web Tools


Notes

Families

[back to top]


Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF01027

edit table

See Help:Evolution_families for help entering or editing information in this section of EcoliWiki.

Notes

Links

[back to top]


Name URL Comments
edit table

See Help:Links_table for how to enter or edit information in this section of EcoliWiki.

References

[back to top]


See Help:References for how to manage references in EcoliWiki.



Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=ybhL:Evolution&oldid=271808"