Paralogs: Difference between revisions
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Table edited by Siegele via TableEdit |
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!|Gene!!Paralog!!Score!!Expect value!!Method!!Amino acid identities!!Amino acid similarities!!Gaps | !|Gene!!Paralog!!Score!!Expect value!!Method!!Amino acid identities!!Amino acid similarities!!Gaps | ||
|- | |||
| | |||
ubiF | |||
| | |||
ubiI | |||
| | |||
208 bits (530) | |||
| | |||
2e-63 | |||
| | |||
BLAST (EcoCyc) | |||
| | |||
138/368 (38%) | |||
| | |||
201/368 (55%) | |||
| | |||
5/368 (1%) | |||
|- | |||
| | |||
ubiF | |||
| | |||
ubiH | |||
| | |||
148 (373) | |||
| | |||
6e-41 | |||
| | |||
BLAST (EcoCyc) | |||
| | |||
95/284 (33%) | |||
| | |||
138/284 (49%) | |||
| | |||
1/284 (0%) | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 18:14, 28 April 2017
Manually curated list of paralogous proteins in the E. coli K-12 genome. IN PROGRESS
| Gene | Paralog gene | Score | Expect | Method | Identities | Positives | Gaps |
|---|---|---|---|---|---|---|---|
|
ubiF |
ubiI |
208 bits (530) |
2e-63 |
BLAST (EcoCyc) |
138/368 (38%) |
201/368 (55%) |
5/368 (1%) |
|
ubiF |
ubiH |
148 bits (373) |
6e-41 |
BLAST (EcoCyc) |
95/284 (33%) |
138/284 (49%) |
1/284 (0%) |
|
ubiF |
mhpA |
35.0 bits (79) |
0.008 |
BLAST (EcoCyc) |
46/204 (23%) |
78/204 (38%) |
26/204 (13%) |
| Gene | Paralog | Score | Expect value | Method | Amino acid identities | Amino acid similarities | Gaps |
|---|---|---|---|---|---|---|---|
|
ubiF |
ubiI |
208 bits (530) |
2e-63 |
BLAST (EcoCyc) |
138/368 (38%) |
201/368 (55%) |
5/368 (1%) |
|
ubiF |
ubiH |
148 (373) |
6e-41 |
BLAST (EcoCyc) |
95/284 (33%) |
138/284 (49%) |
1/284 (0%) |