yfdN:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2351, b2357, JW5385, yzyA''<ref name='LIB:Riley_2006'/>
''ECK2351, b2357, JW5385, yzyA''<ref name='LIB:Riley_2006'/>, yzyA''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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CPS-53 (KpLE1) prophage; predicted protein<ref name='LIB:Riley_2006'/>, B2357<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YzyA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfdN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''CPS-53 (KpLE1) prophage; predicted protein<ref name='LIB:Riley_2006'/>, B2357<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YzyA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfdN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2351, JW5385, yzyA, b2357''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=yfdN&s=search PortEco search(yfdN)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=yfdN&loc=MG1655:2470903..2470409,W3110:2478327..2477833,DH10B:2562668..2562174,BW2952:2356214..2356708 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2356214&end=2356708&gene=yfdN&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yfdN+AND+escherichia+coli Pubmed(yfdN)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yfdN Textpresso(yfdN)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=yfdN&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7226]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003801&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=yfdN&loc=MG1655%3A2470903..2470409,W3110%3A2478327..2477833,DH10B%3A2562668..2562174,BW2952%3A2356214..2356708]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2356214&end=2356708&gene=yfdN&aa=msmsllndvqkfieahpgctsgdiadafagysrqrvlqsasklrqsgrvahrcegdthrhfprlteraqdpepqpvretrpvrnfyvgtndprvilcltrqaeelesrglyrraatvwmaafreshsqpernnflarrerclrksskraasgeewylsgnyvga]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yfdN+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yfdN]]&nbsp;&nbsp;


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Latest revision as of 21:42, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

yfdN

Gene Synonym(s)

ECK2351, b2357, JW5385, yzyA[1], yzyA

Product Desc.

hypothetical protein[2]; CPS-53 (KpLE1) prophage; predicted protein[3]

Function unknown, CPS-53/KpLE1 prophage[4]

Product Synonyms(s)

CPS-53 (KpLE1) prophage; predicted protein[1], B2357[2][1], YzyA[2][1], YfdN[2][1] , ECK2351, JW5385, yzyA, b2357

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yfdK[2]

Regulation/Activity
Quick Links



        

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Notes

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Closely related to orf-41 from bacteriophage SfV of Shigella flexneri.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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