miaB:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0653, b0661, JW0658, yleA''<ref name='LIB:Riley_2006'/>
''ECK0653, b0661, JW0658, yleA''<ref name='LIB:Riley_2006'/>, yleA''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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isopentenyl-adenosine A37 tRNA methylthiolase<ref name='LIB:Riley_2006'/>, B0661<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YleA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MiaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''isopentenyl-adenosine A37 tRNA methylthiolase<ref name='LIB:Riley_2006'/>, B0661<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YleA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MiaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0653, JW0658, yleA, b0661''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=miaB&s=search PortEco search(miaB)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=miaB&loc=MG1655:694178..692754,W3110:695377..693953,DH10B:746770..745346,REL606:675626..677050,BW2952:595514..596938 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=595514&end=596938&gene=miaB&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=miaB+AND+escherichia+coli Pubmed(miaB)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=miaB Textpresso(miaB)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=miaB&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6364]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002971&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=miaB&loc=MG1655%3A694178..692754,W3110%3A695377..693953,DH10B%3A746770..745346,REL606%3A675626..677050,BW2952%3A595514..596938]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=595514&end=596938&gene=miaB&aa=mtkklhiktwgcqmneydsskmadlldathgyqltdvaeeadvlllntcsirekaqekvfhqlgrwkllkeknpdliigvggcvasqegehirqrahyvdiifgpqtlhrlpeminsvrgdrspvvdisfpeiekfdrlpepraegptafvsimegcnkyctycvvpytrgeevsrpsddilfeiaqlaaqgvrevnllgqnvnawrgenydgttgsfadllrlvaaidgidrirfttshpieftddiievyrdtpelvsflhlpvqsgsdrilnlmgrthtaleykaiirklraarpdiqissdfivgfpgettedfektmkliadvnfdmsysfifsarpgtpaadmvddvpeeekkqrlyilqerinqqamawsrrmlgttqrilvegtsrksimelsgrtennrvvnfegtpdmigkfvdveitdvypnslrgkvvrtedemglrvaetpesviartrkendlgvgyyqp]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=miaB+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=miaB]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

miaB

Gene Synonym(s)

ECK0653, b0661, JW0658, yleA[1], yleA

Product Desc.

isopentenyl-adenosine A37 tRNA methylthiolase MiaB[2][3]

tRNA-i(6)A37 methylthiotransferase; contains an iron-sulfur center, SAM-dependent[4]

Product Synonyms(s)

isopentenyl-adenosine A37 tRNA methylthiolase[1], B0661[2][1], YleA[2][1], MiaB[2][1] , ECK0653, JW0658, yleA, b0661

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): miaB[2]

Regulation/Activity
Quick Links



        

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Radical SAM superfamily. rimO and miaB are paralogs. MiaB is required for methylthiolation step of the modified tRNA nucleoside N6-(4-hydroxyisopentenyl)-2-methylthioadenosine.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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