lsrC:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1507, b1514, JW1507, ydeY''<ref name='LIB:Riley_2006'/>
''ECK1507, b1514, JW1507, ydeY''<ref name='LIB:Riley_2006'/>, ydeY''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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AI2 transporter<ref name='LIB:Riley_2006'/>, membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B1514<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''AI2 transporter<ref name='LIB:Riley_2006'/>, membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B1514<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YdeY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1507, JW1507, ydeY, b1514''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=lsrC&s=search PortEco search(lsrC)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=lsrC&loc=MG1655:1601043..1602071,W3110:1604733..1605761,DH10B:1690668..1691696,BW2952:1493102..1494130 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1493102&end=1494130&gene=lsrC&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lsrC+AND+escherichia+coli Pubmed(lsrC)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lsrC Textpresso(lsrC)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=lsrC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6801]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003390&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=lsrC&loc=MG1655%3A1601043..1602071,W3110%3A1604733..1605761,DH10B%3A1690668..1691696,BW2952%3A1493102..1494130]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1493102&end=1494130&gene=lsrC&aa=mlkfiqnnreitallavvllfvlpgfldrqylsvqtltmvyssaqilillamgatlvmltrnidvsvgsitgmcavllgmllnagyslpvacvatlllgllagffngvlvawlkipaivatlgtlglyrgimllwtggkwieglpaelkqlsaplllgvsaigwltiilvafmawllaktafgrsfyatgdnlqgarqlgvrteairivafslngcmaalagivfasqigfipnqtgtglemkaiaacvlggisllggsgaiigavlgawfltqidsvlvllripawwndfiaglvllavlvfdgrlrcalernlrrqkyarfmtpppsvkpassgkkreaa]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lsrC+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=lsrC]]&nbsp;&nbsp;


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Latest revision as of 21:48, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

lsrC

Gene Synonym(s)

ECK1507, b1514, JW1507, ydeY[1], ydeY

Product Desc.

LsrC[2][3];

Component of LsrA/LsrC/LsrD/LsrB ABC transporter[2][3]

Autoinducer-2 (AI-2) uptake[4]

Product Synonyms(s)

AI2 transporter[1], membrane component of ABC superfamily[1], B1514[2][1], YdeY[2][1] , ECK1507, JW1507, ydeY, b1514

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): lsrACDBFG[2]

Regulation/Activity
Quick Links



        

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Notes

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LsrC is paralogous to ribose transport membrane channel protein RbsC and is in an operon regulated by LsrR and LuxS, through AI-2.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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