iraP:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''yaiB, ECK0377, b0382, JW0373''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''yaiB, ECK0377, b0382, JW0373''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>, JW0373''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted protein<ref name='LIB:Riley_2006'/>, B0382<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IraP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''predicted protein<ref name='LIB:Riley_2006'/>, B0382<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaiB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IraP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0377, JW0373, yaiB, b0382''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=iraP&s=search PortEco search(iraP)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=iraP&loc=MG1655:400610..400870,W3110:400610..400870,DH10B:339941..340201,BW2952:303369..303629 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=303369&end=303629&gene=iraP&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=iraP+AND+escherichia+coli Pubmed(iraP)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=iraP Textpresso(iraP)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=iraP&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11256]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001231&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=iraP&loc=MG1655%3A400610..400870,W3110%3A400610..400870,DH10B%3A339941..340201,BW2952%3A303369..303629]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=303369&end=303629&gene=iraP&aa=mknliaellfklaqkeeeskelcaqvealeiivtamlrnmaqndqqrlidqvegalyevkpdasipdddtellrdyvkkllkhprq]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=iraP+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=iraP]]&nbsp;&nbsp;


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Latest revision as of 21:49, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

iraP

Gene Synonym(s)

yaiB, ECK0377, b0382, JW0373[1][2], JW0373

Product Desc.

anti-adaptor protein for σS stabilization[2][3]

RpoS stabilzer during Pi starvation, anti-RssB factor[4]

Product Synonyms(s)

predicted protein[1], B0382[2][1], YaiB[2][1], IraP[2][1] , ECK0377, JW0373, yaiB, b0382

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yaiB[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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IraP interferes with RssB, ClpXP-dependent degradation of RpoS by interacting directly with RssB.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.

[1] [2] [3]

  1. ↑ Bougdour, A et al. (2006) Modulating RssB activity: IraP, a novel regulator of sigma(S) stability in Escherichia coli. Genes Dev. 20 884-97 PubMed
  2. ↑ Tu, X et al. (2006) The PhoP/PhoQ two-component system stabilizes the alternative sigma factor RpoS in Salmonella enterica. Proc. Natl. Acad. Sci. U.S.A. 103 13503-8 PubMed
  3. ↑ Bougdour, A & Gottesman, S (2007) ppGpp regulation of RpoS degradation via anti-adaptor protein IraP. Proc. Natl. Acad. Sci. U.S.A. 104 12896-901 PubMed
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