cfa:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1657, b1661, JW1653, cdfA''<ref name='LIB:Riley_2006'/>
''ECK1657, b1661, JW1653, cdfA''<ref name='LIB:Riley_2006'/>, cdfA''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)<ref name='LIB:Riley_2006'/>, B1661<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CdfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)<ref name='LIB:Riley_2006'/>, B1661<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cfa<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CdfA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , cdfA, ECK1657, JW1653, b1661''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=cfa&s=search PortEco search(cfa)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=cfa&loc=MG1655:1739437..1740585,W3110:1743127..1744275,DH10B:1830008..1831156,REL606:1718680..1719828,BW2952:1631496..1632644 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1631496&end=1632644&gene=cfa&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cfa+AND+escherichia+coli Pubmed(cfa)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cfa Textpresso(cfa)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=cfa&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11531]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001485&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=cfa&loc=MG1655%3A1739437..1740585,W3110%3A1743127..1744275,DH10B%3A1830008..1831156,REL606%3A1718680..1719828,BW2952%3A1631496..1632644]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1631496&end=1632644&gene=cfa&aa=mssscieevsvpddnwyrianellsragiaingsapadirvknpdffkrvlqegslglgesymdgwwecdrldmffskvlraglenqlphhfkdtlriagarlfnlqskkrawivgkehydlgndlfsrmldpfmqyscaywkdadnlesaqqaklkmiceklqlkpgmrvldigcgwgglahymasnydvsvvgvtisaeqqkmaqercegldvtillqdyrdlndqfdrivsvgmfehvgpknydtyfavvdrnlkpegifllhtigskktdlnvdpwinkyifpngclpsvrqiaqssephfvmedwhnfgadydttlmawyerflaawpeiadnyserfkrmftyylnacagafrardiqlwqvvfsrgvenglrvar]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cfa+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=cfa]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

cfa

Gene Synonym(s)

ECK1657, b1661, JW1653, cdfA[1], cdfA

Product Desc.

Cfa[2][3];

Component of cyclopropane fatty acyl phospholipid synthase[2][3]

Cyclopropane fatty acid synthase; CFA lipid modification is required for acid resistance in early stationary phase[4]

Product Synonyms(s)

cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)[1], B1661[2][1], Cfa[2][1], CdfA[2][1] , cdfA, ECK1657, JW1653, b1661

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cfa[2], cdfA

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Cfa binds a bicarbonate ion that is involved in catalysis. RpoS regulon. Overexpression causes abnormal biofilm architecture.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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