asr:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1592, b1597, JW5826''<ref name='LIB:Riley_2006'/>
''ECK1592, b1597, JW5826''<ref name='LIB:Riley_2006'/>, JW5826''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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acid shock-inducible periplasmic protein<ref name='LIB:Riley_2006'/>, B1597<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Asr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''acid shock-inducible periplasmic protein<ref name='LIB:Riley_2006'/>, B1597<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Asr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK1592, JW5826, b1597''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=asr&s=search PortEco search(asr)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=asr&loc=MG1655:1669400..1669708,W3110:1673090..1673398,DH10B:1760361..1760669,REL606:1648571..1648879,BW2952:1561459..1561767 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1561459&end=1561767&gene=asr&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=asr+AND+escherichia+coli Pubmed(asr)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=asr Textpresso(asr)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=asr&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6855]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120003444&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=asr&loc=MG1655%3A1669400..1669708,W3110%3A1673090..1673398,DH10B%3A1760361..1760669,REL606%3A1648571..1648879,BW2952%3A1561459..1561767]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1561459&end=1561767&gene=asr&aa=mkkqiegmtmkkvlalvvaaamglssaafaaettttpaptatttkaapaktthhkkqhkaapaqkaqaakkhhkntkaeqkapeqkaqaakkhakkhshqqpakpaaqpaa]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=asr+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=asr]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

asr

Gene Synonym(s)

ECK1592, b1597, JW5826[1], JW5826

Product Desc.

acid shock protein[2][3]

Acid shock-inducible periplasmic protein required for acid tolerance; expression controlled by phoBR[4]

Product Synonyms(s)

acid shock-inducible periplasmic protein[1], B1597[2][1], Asr[2][1] , ECK1592, JW5826, b1597

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): asr[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Asr start codon confirmed by site-directed mutagenesis. Asr 21 aa signal peptide cleavage also confirmed by N-terminal sequencing. Protease responsible for second Asr N-terminal cleavage is unknown, but is not DegP.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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