ycdT:Quickview: Difference between revisions
touch QV table |
touch |
||
| Line 63: | Line 63: | ||
!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
|| | || | ||
[http://porteco.org/AjaxSearch.jsp?searchString=ycdT&s=search PortEco search(ycdT)] [http://ecoliwiki.net/tools/display_dna.php?gene=ycdT&loc=MG1655:1092099..1093457,W3110:1093298..1094656,DH10B:1146027..1148721,REL606:1109161..1110519,BW2952:995843..997201 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=995843&end=997201&gene=ycdT&aa= | [http://porteco.org/AjaxSearch.jsp?searchString=ycdT&s=search PortEco search(ycdT)] [http://ecoliwiki.net/tools/display_dna.php?gene=ycdT&loc=MG1655:1092099..1093457,W3110:1093298..1094656,DH10B:1146027..1148721,REL606:1109161..1110519,BW2952:995843..997201 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=995843&end=997201&gene=ycdT&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ycdT+AND+escherichia+coli Pubmed(ycdT)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ycdT Textpresso(ycdT)] | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 20:18, 16 August 2011
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ycdT |
|---|---|
| Gene Synonym(s) |
ECK1015, b1025, JW5143[1] |
| Product Desc. |
predicted diguanylate cyclase[2][3] Probable diguanylate cyclase, function unknown[4] |
| Product Synonyms(s) | |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(ycdT) DNA display Protein display Pubmed(ycdT) Textpresso(ycdT) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YcdT is homolgous to Y. pestis hemin storage gene hmsT, but is unable to complement hmsT mutations. Shown not to be a regulator of the divergent pgaABCD operon. Codon usage indicates ycdT is an alien (horizontal) gene. YcdT has a C-terminal putative diguanylate cyclase GGDEF domain.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.