ahpF:Quickview: Difference between revisions

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[http://porteco.org/AjaxSearch.jsp?searchString=ahpF&s=search PortEco search(ahpF)]    [http://ecoliwiki.net/tools/display_dna.php?gene=ahpF&loc=MG1655:638976..640541,W3110:638976..640541,DH10B:578308..579873,DH10B:691568..693133,REL606:621804..623369,BW2952:541736..543301 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=541736&end=543301&gene=ahpF&aa=mmmfkaqeinmldtnmktqlkaylekltkpveliatlddsaksaeikellaeiaelsdkvtfkednslpvrkpsflitnpgsnqgprfagsplgheftslvlallwtgghpskeaqslleqirhidgdfefetyyslschncpdvvqalnlmsvlnprikhtaidggtfqneitdrnvmgvpavfvngkefgqgrmtlteivakidtgaekraaeelnkrdaydvlivgsgpagaaaaiysarkgirtglmgerfggqildtvdienyisvpktegqklagalkvhvdeydvdvidsqsasklipaavegglhqietasgavlkarsiivatgakwrnmnvpgedqyrtkgvtycphcdgplfkgkrvavigggnsgveaaidlagivehvtllefapemkadqvlqdklrslknvdiilnaqttevkgdgskvvgleyrdrvsgdihnielagifvqigllpntnwlegavernrmgeiiidakcetnvkgvfaagdcttvpykqiiiatgegakaslsafdylirtkta Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ahpF+AND+escherichia+coli Pubmed(ahpF)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ahpF Textpresso(ahpF)]
[http://porteco.org/AjaxSearch.jsp?searchString=ahpF&s=search PortEco search(ahpF)]    [http://ecoliwiki.net/tools/display_dna.php?gene=ahpF&loc=MG1655:638976..640541,W3110:638976..640541,DH10B:578308..579873,DH10B:691568..693133,REL606:621804..623369,BW2952:541736..543301 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=541736&end=543301&gene=ahpF&aa= Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ahpF+AND+escherichia+coli Pubmed(ahpF)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=ahpF Textpresso(ahpF)]


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Revision as of 21:14, 15 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ahpF

Gene Synonym(s)

ECK0600, b0606, JW0599[1]

Product Desc.

AhpF component[2][3];

Component of alkylhydroperoxide reductase[3]

Alkyl hydroperoxide reductase, subunit F; NAD(P)H:peroxiredoxin oxidoreductase, reduces AhpC; contains one FAD/monomer[4]

Product Synonyms(s)

alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding[1], B0606[2][1], AhpF[2][1], alkyl hydroperoxide reductase, F52a subunit[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ahpF[2], ahpCF[2], OP00101, ahpC

Regulation/Activity
Quick Links

PortEco search(ahpF)    DNA display    Protein display    Pubmed(ahpF)    Textpresso(ahpF)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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The native AhpF from Salmonella has been N-terminally sequenced (Jacobson et al, 1989), supporting the choice of this alternate initiation codon in E. coli by inference.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.