yhbJ:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=yhbJ&s=search PortEco search(yhbJ)] [http://ecoliwiki.net/tools/display_dna.php?gene=yhbJ&loc=MG1655:3345137..3345991,W3110:3346970..3347824,DH10B:3442882..3443736,REL606:3282350..3283204,BW2952:3232285..3233139 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3232285&end=3233139&gene=yhbJ&aa=mvlmivsgrsgsgksvalraledmgfycvdnlpvvllpdlartladreisaavsidvrnmpespeifeqamsnlpdafspqllfldadrntlirrysdtrrlhplssknlslesaidkesdlleplrsradlivdtsemsvhelaemlrtrllgkrereltmvfesfgfkhgipidadyvfdvrflpnphwdpklrpmtgldkpvaafldrhtevhnfiyqtrsylelwlpmletnnrsyltvaigctggkhrsvyiaeqladyfrsrgknvqsrhrtlekrkp Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yhbJ+AND+escherichia+coli Pubmed(yhbJ)] [http:// | [http://porteco.org/AjaxSearch.jsp?searchString=yhbJ&s=search PortEco search(yhbJ)] [http://ecoliwiki.net/tools/display_dna.php?gene=yhbJ&loc=MG1655:3345137..3345991,W3110:3346970..3347824,DH10B:3442882..3443736,REL606:3282350..3283204,BW2952:3232285..3233139 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3232285&end=3233139&gene=yhbJ&aa=mvlmivsgrsgsgksvalraledmgfycvdnlpvvllpdlartladreisaavsidvrnmpespeifeqamsnlpdafspqllfldadrntlirrysdtrrlhplssknlslesaidkesdlleplrsradlivdtsemsvhelaemlrtrllgkrereltmvfesfgfkhgipidadyvfdvrflpnphwdpklrpmtgldkpvaafldrhtevhnfiyqtrsylelwlpmletnnrsyltvaigctggkhrsvyiaeqladyfrsrgknvqsrhrtlekrkp Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yhbJ+AND+escherichia+coli Pubmed(yhbJ)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yhbJ Textpresso(yhbJ)] | ||
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Revision as of 18:38, 27 June 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yhbJ |
|---|---|
| Gene Synonym(s) |
ECK3194, b3205, JW3172[1] |
| Product Desc. |
predicted P-loop containing ATPase[2][3] Senses glucosamine-6-phosphate and inactivates glmZ sRNA; NTPase[4] |
| Product Synonyms(s) |
predicted protein with nucleoside triphosphate hydrolase domain[1], B3205[2][1], YhbJ[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): lptB-rpoN-yhbH-ptsN-yhbJ[2], yhbG-rpoN-yhbH-ptsN-yhbJ, rpoN-yhbH-ptsN-yhbJ-npr[2], rpoN-ORFII-ORF-III-ORF-IV-ORFV, rpoN-yhbH-ptsN-yhbJ-ptsO |
| Regulation/Activity | |
| Quick Links |
PortEco search(yhbJ) DNA display Protein display Pubmed(yhbJ) Textpresso(yhbJ) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Unprocessed glmZ upregulates glmS mRNA, so yhbJ mediates the negative feedback regulation of glmS, through glmZ, by the GlmS product glucosamine-6-phosphate. AFMB Structural Genomics target No. 26 (http://afmb.cnrs-mrs.fr/article171.html). The rpoN operon contains rpoN-hpf-ptsN-yhbJ-npr. UPF0042 family. YhbJ binds ATP and GTP and is an NTPase (Luciano, 2009).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.