yffL:Quickview: Difference between revisions

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[http://porteco.org/AjaxSearch.jsp?searchString=yffL&s=search PortEco search(yffL)]    [http://ecoliwiki.net/tools/display_dna.php?gene=yffL&loc=MG1655:2558279..2558920,DH10B:2650044..2650685,BW2952:2444084..2444725 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2444084&end=2444725&gene=yffL&aa=mfatkdpefenrintnksprnaatcrgryekqakgeflmsdmlaveqetnndvrqflnkinelrnkapkneetkheehtpdnheetdhheakqqeqawrgnlryldtlnrldevlprklyerwekehtvndeavlralcyfagtgknsqlgwcrvgrgtidkrarlskntvkkcldrlvnhfklvertegyipgsaerecneyqllfkpynmk Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yffL+AND+escherichia+coli Pubmed(yffL)]    [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=yffL Textpresso(yffL)]
[http://porteco.org/AjaxSearch.jsp?searchString=yffL&s=search PortEco search(yffL)]    [http://ecoliwiki.net/tools/display_dna.php?gene=yffL&loc=MG1655:2558279..2558920,DH10B:2650044..2650685,BW2952:2444084..2444725 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2444084&end=2444725&gene=yffL&aa=mfatkdpefenrintnksprnaatcrgryekqakgeflmsdmlaveqetnndvrqflnkinelrnkapkneetkheehtpdnheetdhheakqqeqawrgnlryldtlnrldevlprklyerwekehtvndeavlralcyfagtgknsqlgwcrvgrgtidkrarlskntvkkcldrlvnhfklvertegyipgsaerecneyqllfkpynmk Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yffL+AND+escherichia+coli Pubmed(yffL)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=yffL Textpresso(yffL)]


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Revision as of 18:36, 27 June 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

yffL

Gene Synonym(s)

ECK2438, b2443, unique to MG1655[1]

Product Desc.

CPZ-55 prophage; predicted protein[2][3]

Function unknown, Eut/CPZ-55 prophage[4]

Product Synonyms(s)

CPZ-55 prophage; predicted protein[1], B2443[2][1], YffL[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yffL[2]

Regulation/Activity
Quick Links

PortEco search(yffL)    DNA display    Protein display    Pubmed(yffL)    Textpresso(yffL)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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56 bp downstream of the yffL stop codon is the first of four tandem intergenic repeats CPX-R(1-4) of unknown function. CPX-R(1-3) are direct 22 bp repeats and CPX-R4 is a 19 bp version.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.