rhsB:Quickview: Difference between revisions

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[http://ecoliwiki.net/tools/display_dna.php?gene=rhsB&loc=MG1655:3617215..3621450,W3110:4021223..4016988,REL606:3549880..3554115,DH10B:3714960..3719195,BW2952:3505709..3509944 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3505709&end=3509944&gene=rhsB&aa=msgkpaarqgdmtqyggsivqgsagvrigaptgvacsvcpggvtsghpvnpllgakvlpgetdialpgplpfilsrtyssyrtktpapvgslgpgwkmpadirlqlrdntlilsdnggrslyfehlfpgedgysrseslwlvrggvakldeghrlaalwqalpeelrlsphrylatnspqgpwwllgwcervpeadevlpaplppyrvltglvdrfgrtqtfhreaagefsgeitgvtdgawrhfrlvlttqaqraeearqqaisggtepsafpdtlpgyteygrdngirlsavwlthdpeypenlpaaplvrygwtprgelavvydrsgkqvrsftyddkyrgrmvahrhtgrpeiryrydsdgrvteqlnpaglsytyqyekdrititdsldrrevlhtqgeaglkrvvkkehadgsvtqsqfdavgrlraqtdaagrtteyspdvvtglitrittpdgrasafyynhhnqltsatgpdglelrreydelgrliqetapdgditryrydnphsdlpcatedatgsrktmtwsrygqllsftdcsgyvtrydhdrfgqmtavhreeglsqyraydsrgqliavkdtqghetryeyniagdltaviapdgsrngtqydawgkavrttqggltrsmeydaagrvirltsengshttfrydvldrliqetgfdgrtqryhhdltgklirsedeglvthwhydeadrlthrtvkgetaerwqydergwltdishiseghrvavhyrydekgrltgerqtvhhpqteallwqhetrhaynaqglanrcipdslpavewltygsgylagmklgdtplveytrdrlhretlrsfgryelttaytpagqlqsqhlnsllsdrdytwndngelirissprqtrsysysttgrltgvhttaanldiripyatdpagnrlpdpelhpdstlsmwpdnriardahylyrydrhgrltektdlipegvirtdderthryhydsqhrlvhytrtqyeeplvesrylydplgrrvakrvwrrerdltgwmslsrkpqvtwygwdgdrlttiqndrsriqtiyqpgsftplirvetatgelaktqrrsladalqqsggedggsvvfppvlvqmldrleseiladrvseesrrwlascgltveqmqnqmdpvytparkihlyhcdhrglplalistegatawcaeydewgnllneenphqlqqlirlpgqqydeesglyynrhryydplqgryitqdpiglkggwnlygyqlnpisdidplglsmwedaksgactnglcgtlsamigpdkfdsidstaydalnkinsqsicedkefaglickdnsgryfstapnrgerkgsypfnspcpngtekvsayhthgadshgeywdeifsgkdekivkskdnniksfylgtpsgnfkaidnhgkeitnrkglpnvcrvhgnm Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhsB+AND+escherichia+coli Pubmed(rhsB)]    [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=rhsB Textpresso(rhsB)]
[http://porteco.org/AjaxSearch.jsp?searchString=rhsB&s=search PortEco search(rhsB)]    [http://ecoliwiki.net/tools/display_dna.php?gene=rhsB&loc=MG1655:3617215..3621450,W3110:4021223..4016988,REL606:3549880..3554115,DH10B:3714960..3719195,BW2952:3505709..3509944 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3505709&end=3509944&gene=rhsB&aa=msgkpaarqgdmtqyggsivqgsagvrigaptgvacsvcpggvtsghpvnpllgakvlpgetdialpgplpfilsrtyssyrtktpapvgslgpgwkmpadirlqlrdntlilsdnggrslyfehlfpgedgysrseslwlvrggvakldeghrlaalwqalpeelrlsphrylatnspqgpwwllgwcervpeadevlpaplppyrvltglvdrfgrtqtfhreaagefsgeitgvtdgawrhfrlvlttqaqraeearqqaisggtepsafpdtlpgyteygrdngirlsavwlthdpeypenlpaaplvrygwtprgelavvydrsgkqvrsftyddkyrgrmvahrhtgrpeiryrydsdgrvteqlnpaglsytyqyekdrititdsldrrevlhtqgeaglkrvvkkehadgsvtqsqfdavgrlraqtdaagrtteyspdvvtglitrittpdgrasafyynhhnqltsatgpdglelrreydelgrliqetapdgditryrydnphsdlpcatedatgsrktmtwsrygqllsftdcsgyvtrydhdrfgqmtavhreeglsqyraydsrgqliavkdtqghetryeyniagdltaviapdgsrngtqydawgkavrttqggltrsmeydaagrvirltsengshttfrydvldrliqetgfdgrtqryhhdltgklirsedeglvthwhydeadrlthrtvkgetaerwqydergwltdishiseghrvavhyrydekgrltgerqtvhhpqteallwqhetrhaynaqglanrcipdslpavewltygsgylagmklgdtplveytrdrlhretlrsfgryelttaytpagqlqsqhlnsllsdrdytwndngelirissprqtrsysysttgrltgvhttaanldiripyatdpagnrlpdpelhpdstlsmwpdnriardahylyrydrhgrltektdlipegvirtdderthryhydsqhrlvhytrtqyeeplvesrylydplgrrvakrvwrrerdltgwmslsrkpqvtwygwdgdrlttiqndrsriqtiyqpgsftplirvetatgelaktqrrsladalqqsggedggsvvfppvlvqmldrleseiladrvseesrrwlascgltveqmqnqmdpvytparkihlyhcdhrglplalistegatawcaeydewgnllneenphqlqqlirlpgqqydeesglyynrhryydplqgryitqdpiglkggwnlygyqlnpisdidplglsmwedaksgactnglcgtlsamigpdkfdsidstaydalnkinsqsicedkefaglickdnsgryfstapnrgerkgsypfnspcpngtekvsayhthgadshgeywdeifsgkdekivkskdnniksfylgtpsgnfkaidnhgkeitnrkglpnvcrvhgnm Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rhsB+AND+escherichia+coli Pubmed(rhsB)]    [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=rhsB Textpresso(rhsB)]


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Revision as of 08:27, 27 May 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rhsB

Gene Synonym(s)

ECK3466, b3482, JW5679[1]

Product Desc.

RhsB protein in rhs element[2][3]

Function unknown, encoded within RhsB repeat; hotspot for chromosomal duplication formation[4]

Product Synonyms(s)

rhsB element core protein RshB[1], B3482[2][1], RhsB[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rhsB[2]

Regulation/Activity
Quick Links

PortEco search(rhsB)    DNA display    Protein display    Pubmed(rhsB)    Textpresso(rhsB)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Swiss-Prot prediction of 26 aa signal peptide is a probable false positve.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.