raiA:Quickview: Difference between revisions
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[http://ecoliwiki.net/tools/display_dna.php?gene=raiA&loc=MG1655:2735176..2735517,W3110:2735810..2736151,BW2952:2620988..2621329 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2620988&end=2621329&gene=raiA&aa=mtmnitskqmeitpairqhvadrlaklekwqthlinphiilskepqgfvadatintpngvlvasgkhedmytainelinklerqlnklqhkgearraatsvkdanfveeveee Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=raiA+AND+escherichia+coli Pubmed(raiA)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=raiA Textpresso(raiA)] | [http://porteco.org/AjaxSearch.jsp?searchString=raiA&s=search PortEco search(raiA)] [http://ecoliwiki.net/tools/display_dna.php?gene=raiA&loc=MG1655:2735176..2735517,W3110:2735810..2736151,BW2952:2620988..2621329 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2620988&end=2621329&gene=raiA&aa=mtmnitskqmeitpairqhvadrlaklekwqthlinphiilskepqgfvadatintpngvlvasgkhedmytainelinklerqlnklqhkgearraatsvkdanfveeveee Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=raiA+AND+escherichia+coli Pubmed(raiA)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=raiA Textpresso(raiA)] | ||
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Revision as of 08:25, 27 May 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
raiA |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
stationary phase translation inhibitor and ribosome stability factor[3][2] Protein Y, associated with 30S ribosomal subunit; inhibits 70S dimer formation; stabilizes the ribosomal 70S complex against dissociation at low magnesium ion concentrations; counteracts miscoding under stress conditions [4] |
| Product Synonyms(s) |
cold shock protein associated with 30S ribosomal subunit[1], B2597[3][1], YfiA[3][1], Urf1[3][1], RaiA[3][1], pY[3][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype |
Non-essential [5] |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(raiA) DNA display Protein display Pubmed(raiA) Textpresso(raiA) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
RaiA is a ribosome-associated factor that is induced in stationary phase. hpf paralog has opposite effect on 70S dimers.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 3.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Bubunenko, M et al. (2007) Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli. J. Bacteriol. 189 2844-53 PubMed