yadG:Evolution: Difference between revisions

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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52540 SUPERFAMILY:52540]
[http://pfam.janelia.org/family/PF00005 PF00005  ABC transporter]
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[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24220:SF186 PTHR24220:SF186]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=52540 SUPERFAMILY:52540]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://www.pantherdb.org/ Panther] ([[Panther|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00005 PF00005  ABC transporter]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24220:SF186 PTHR24220:SF186]
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Revision as of 20:03, 16 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT5G61730 (score: 1.000; bootstrap: 84%)
  • AT5G61690 (score: 0.800)
  • AT3G47730 (score: 0.744)
  • AT3G47780 (score: 0.088)
  • AT3G47740 (score: 0.083)
  • AT3G47790 (score: 0.080)
  • AT3G47770 (score: 0.077)
  • AT5G61700 (score: 0.076)
  • AT3G47750 (score: 0.076)
  • AT5G61740 (score: 0.070)
  • AT3G47760 (score: 0.068)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00026658 (score: 1.000; bootstrap: 97%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000013883 (score: 1.000; bootstrap: 95%)
  • ENSCINP00000011530 (score: 0.219)

From Inparanoid:20070104

Oryza gramene

  • Q6ZIW1 (score: 1.000; bootstrap: 89%)
  • Q6ZIV9 (score: 0.083)
  • Q69XA0 (score: 0.080)
  • Q6H8C3 (score: 0.056)

From Inparanoid:20070104

Shigella flexneri

YADG

From SHIGELLACYC

E. coli O157

YADG

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00005 ABC transporter

Superfamily (EcoliWiki Page)

SUPERFAMILY:52540

Panther (EcoliWiki Page)

PTHR24220:SF186



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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