rpsN:Evolution: Difference between revisions

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deleting Pfam from accessions table on evolution pages
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=57716 SUPERFAMILY:57716]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=57716 SUPERFAMILY:57716]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00253 PF00253  Ribosomal protein S14p/S29e] 
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Revision as of 19:21, 26 October 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT2G34520 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000001465 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000011230 (score: 0.899)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000021200 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000009694 (score: 0.852)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0044030 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000007228 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000239463 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000002103 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000005409 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Mus musculus

  • MGI:1928141 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q95H62 (score: 1.000; bootstrap: 100%)
  • P08527 (score: 0.921)
  • Q7G7B6 (score: 0.907)
  • Q6QY76 (score: 0.907)
  • Q6L3A0 (score: 0.907)
  • Q6ENW5 (score: 0.907)
  • P09096 (score: 0.907)
  • Q6ENH6 (score: 0.907)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000002839 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000003460 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YPR166C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAC23H37c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000161261 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00028389001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000043407 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

RPSN

From SHIGELLACYC

E. coli O157

RPSN

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Panther (EcoliWiki Page)

PTHR19836:SF1

Superfamily (EcoliWiki Page)

SUPERFAMILY:57716

Pfam (EcoliWiki Page)

PF00253 Ribosomal protein S14p/S29e



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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