cfa:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
update QV table
touch QV table
Line 29: Line 29:
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''cfa''  
''cfa''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
Line 65: Line 65:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://ecoliwiki.net/tools/display_dna.php?gene=cfa&loc=MG1655:1739437..1740585,W3110:1743127..1744275,DH10B:1830008..1831156,REL606:1718680..1719828 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1718680&end=1719828&gene=cfa&aa=mssscieevsvpddnwyrianellsragiaingsapadirvknpdffkrvlqegslglgesymdgwwecdrldmffskvlraglenqlphhfkdtlriagarlfnlqskkrawivgkehydlgndlfsrmldpfmqyscaywkdadnlesaqqaklkmiceklqlkpgmrvldigcgwgglahymasnydvsvvgvtisaeqqkmaqercegldvtillqdyrdlndqfdrivsvgmfehvgpknydtyfavvdrnlkpegifllhtigskktdlnvdpwinkyifpngclpsvrqiaqssephfvmedwhnfgadydttlmawyerflaawpeiadnyserfkrmftyylnacagafrardiqlwqvvfsrgvenglrvar Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cfa+AND+escherichia+coli Pubmed(cfa)]    [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cfa Textpresso(cfa)]
[http://ecoliwiki.net/tools/display_dna.php?gene=cfa&loc=MG1655:1739437..1740585,W3110:1743127..1744275,DH10B:1830008..1831156,REL606:1718680..1719828 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1718680&end=1719828&gene=cfa&aa=mssscieevsvpddnwyrianellsragiaingsapadirvknpdffkrvlqegslglgesymdgwwecdrldmffskvlraglenqlphhfkdtlriagarlfnlqskkrawivgkehydlgndlfsrmldpfmqyscaywkdadnlesaqqaklkmiceklqlkpgmrvldigcgwgglahymasnydvsvvgvtisaeqqkmaqercegldvtillqdyrdlndqfdrivsvgmfehvgpknydtyfavvdrnlkpegifllhtigskktdlnvdpwinkyifpngclpsvrqiaqssephfvmedwhnfgadydttlmawyerflaawpeiadnyserfkrmftyylnacagafrardiqlwqvvfsrgvenglrvar Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cfa+AND+escherichia+coli Pubmed(cfa)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=cfa Textpresso(cfa)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 22:06, 2 March 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

cfa

Gene Synonym(s)

ECK1657, b1661, JW1653, cdfA[1]

Product Desc.

Cfa[2][3];

Component of cyclopropane fatty acyl phospholipid synthase[2][3]

Cyclopropane fatty acid synthase; CFA lipid modification is required for acid resistance in early stationary phase[4]

Product Synonyms(s)

cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase)[1], B1661[2][1], Cfa[2][1], CdfA[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): cfa[2], cdfA

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(cfa)    Textpresso(cfa)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Cfa binds a bicarbonate ion that is involved in catalysis. RpoS regulon. Overexpression causes abnormal biofilm architecture.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.