ssb:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
update QV table
touch QV table
Line 29: Line 29:
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''ssb''  
''ssb''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
Line 63: Line 63:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ssb&loc=MG1655:4272148..4272684,W3110:4277715..4278251,REL606:4253058..4253594,DH10B:4371844..4372380 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4371844&end=4372380&gene=ssb&aa=masrgvnkvilvgnlgqdpevrympnggavanitlatseswrdkatgemkeqtewhrvvlfgklaevaseylrkgsqvyiegqlrtrkwtdqsgqdryttevvvnvggtmqmlggrqgggapaggnigggqpqggwgqpqqpqggnqfsggaqsrpqqsapaapsneppmdfdddipf Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ssb+AND+escherichia+coli Pubmed(ssb)]    [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ssb Textpresso(ssb)]
[http://ecoliwiki.net/tools/display_dna.php?gene=ssb&loc=MG1655:4272148..4272684,W3110:4277715..4278251,REL606:4253058..4253594,DH10B:4371844..4372380 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4371844&end=4372380&gene=ssb&aa=masrgvnkvilvgnlgqdpevrympnggavanitlatseswrdkatgemkeqtewhrvvlfgklaevaseylrkgsqvyiegqlrtrkwtdqsgqdryttevvvnvggtmqmlggrqgggapaggnigggqpqggwgqpqqpqggnqfsggaqsrpqqsapaapsneppmdfdddipf Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ssb+AND+escherichia+coli Pubmed(ssb)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ssb Textpresso(ssb)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 22:30, 2 March 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ssb

Gene Synonym(s)

ECK4051, b4059, JW4020, exrB, lexC[1]

Product Desc.

ssDNA-binding protein[2][3]

Single-stranded DNA-binding protein; alkali-inducible; homotetramer[4]

Product Synonyms(s)

Single-stranded DNA-binding protein[1], B4059[2][1], LexC[2][1], ExrB[2][1], Ssb[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ssb[2], OP00091

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(ssb)    Textpresso(ssb)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


SSB binds to RecQ and stimulates DNA unwinding (Shereda, 2007). Secondary structure of DNA does not effect binding of SSB. SSB increases the binding of RecA in DNA with secondary structure. LexA regulon.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.