pliG:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
update QV table
touch QV table
Line 29: Line 29:
!align=left {{table_heading_style}} |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''ycgK''  
''ycgK''
|-
|-
!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
Line 63: Line 63:
!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
||
||
[http://ecoliwiki.net/tools/display_dna.php?gene=ycgK&loc=MG1655:1226695..1226294,W3110:1229049..1228648,DH10B:1266936..1266535,REL606:1227633..1227232 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1227633&end=1227232&gene=ycgK&aa=mkiksirkavlllalltstsfaagknvnvefrkghssaqysgeikgydydtytfyakkgqkvhvsisnegadtylfgpgiddsvdlsryspeldshgqyslpasgkyelrvlqtrndarknktkkynvdiqik Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ycgK+AND+escherichia+coli Pubmed(ycgK)]    [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ycgK Textpresso(ycgK)]
[http://ecoliwiki.net/tools/display_dna.php?gene=ycgK&loc=MG1655:1226695..1226294,W3110:1229049..1228648,DH10B:1266936..1266535,REL606:1227633..1227232 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1227633&end=1227232&gene=ycgK&aa=mkiksirkavlllalltstsfaagknvnvefrkghssaqysgeikgydydtytfyakkgqkvhvsisnegadtylfgpgiddsvdlsryspeldshgqyslpasgkyelrvlqtrndarknktkkynvdiqik Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ycgK+AND+escherichia+coli Pubmed(ycgK)]    [http://trimer.tamu.edu/cgi-bin/textpresso/dev/search?q=ycgK Textpresso(ycgK)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 22:36, 2 March 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ycgK

Gene Synonym(s)

ECK1166, b1178, JW1167[1]

Product Desc.

predicted protein[2][3]

Secreted protein, function unknown[4]

Product Synonyms(s)

predicted protein[1], YcgK[2][1], B1178[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ycgK[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(ycgK)    Textpresso(ycgK)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


First 22 aa are predicted to be a type I signal peptide. YcgK has an Ig-like domain: pfam PF004151 aligns to residues 48-130.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.