hicB:Quickview: Difference between revisions
Jump to navigation
Jump to search
update QV table |
BatchPageMover script. |
||
| Line 10: | Line 10: | ||
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | -->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css> | ||
<noinclude>{{TabsTop}} | <noinclude>{{TabsTop}} | ||
{{Tab On|Quickview| | {{Tab On|Quickview|hicB}}{{Tab|Gene|hicB}}{{Tab|Gene Product(s)|hicB}}{{Tab|Expression|hicB}}{{Tab|Evolution|hicB}}{{Tab|On One Page|hicB}}{{TabsBottom}} | ||
{| | {| | ||
|- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;" | |- style="background-color:white; border:solid 2px #CCFFFF; text-align:center; white-space: nowrap;" | ||
| Line 29: | Line 29: | ||
!align=left {{table_heading_style}} |Standard Name | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
'' | ''hicB'' | ||
|- | |- | ||
!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK1432, b1438, JW1433''<ref name='LIB:Riley_2006'/> | ''ECK1432, b1438, JW1433''<ref name='LIB:Riley_2006'/>, ydcQ product | ||
|- | |- | ||
!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
| Line 63: | Line 63: | ||
!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
|| | || | ||
[http://ecoliwiki.net/tools/display_dna.php?gene= | [http://ecoliwiki.net/tools/display_dna.php?gene=hicB&loc=MG1655:1507511..1507948,W3110:1511201..1511638,DH10B:1598106..1598543,REL606:1479597..1480034 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1479597&end=1480034&gene=hicB&aa=mretveimrypvtltpapeggymvsfvdipealtqgetvaeameaakdalltafdfyfedneliplpsplnshdhfievplsvaskvlllnaflqseitqqelarrigkpkqeitrlfnlhhatkidavqlaakalgkelslvmv Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hicB+AND+escherichia+coli Pubmed(hicB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=hicB Textpresso(hicB)] | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 19:42, 2 March 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
hicB |
|---|---|
| Gene Synonym(s) |
ECK1432, b1438, JW1433[1], ydcQ product |
| Product Desc. |
hypothetical protein[2]; predicted DNA-binding transcriptional regulator[3] Antitoxin for the YncN(HicA) mRNA interferase toxin; mutational suppressor of null rpoE lethality[4] |
| Product Synonyms(s) |
predicted DNA-binding transcriptional regulator[1], B1438[2][1], YdcQ[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
IS insertions in ydcQ were isolated as suppressors of rpoE lethality; in wt cells, ydcQ mutants downregulate extracytoplasmic stress responses and OM vesicle production is reduced (Button, 2006). A longer 145 aa translation is unlikely due to a poor RBS and a lack of seqeunce conservation.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.