pdhR:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
update QV table
update QV table
Line 47: Line 47:
!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
||
||
'''Biological Process'''
<GO_nr />
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP])
'''Molecular Function'''
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP])
 
|-
|-
!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype

Revision as of 19:31, 2 February 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

pdhR

Gene Synonym(s)

ECK0112, b0113, JW0109, yacB, aceC, genA, dcuA'[1][2]

Product Desc.

PdhR transcriptional dual regulator[2][3]

Pyruvate dehydrogenase operon (pdhR-aceEF-lpd) repressor; autoregulatory; pyruvate relieves repression; monomeric[4]

Product Synonyms(s)

DNA-binding transcriptional dual regulator[1], B0113[2][1], YacB[2][1], GenA[2][1], PdhR[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pdhR-aceEF-lpdA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(pdhR)    Textpresso(pdhR)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The N-terminus of overexpressed PdhR has been determined (Quail and Guest, 1995), indicating that the initial Met is removed. however, the native pdhR RBS was not used, so PdhR is not in the Verified Set, although this is probably the correct start. PdhR is a GntR-type DNA-binding transcriptional regulator.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.