pgaA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
<GO_nr />
* GO:0006810 transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0042710 biofilm formation ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Molecular Function'''
* GO:0022891 substrate-specific transmembrane transporter activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype

Revision as of 19:31, 2 February 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

pgaA

Gene Synonym(s)

ycdS, ECK1014, b1024, JW1010, hmsH[1][2]

Product Desc.

predicted outer membrane protein[2][3]

Biofilm adhesin polysaccharide PGA export; putative OM protein[4]

Product Synonyms(s)

predicted outer membrane protein[1], B1024[2][1], YcdS[2][1], HmsH[2][1], PgaA[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pgaABCD[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(pgaA)    Textpresso(pgaA)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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PgaA is homolgous to Y. pestis hemin storage protein HmsH, but is unable to complement hmsH mutations. PgaA is predicted to have a 26 aa signal peptide. CsrA regulon. PGA is oly-beta-1,6-N-acetyl-D-glucosamine.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.