ycbB:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0008954 peptidoglycan synthetase activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0016755 transferase activity, transferring amino-acyl groups ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0016807 cysteine-type carboxypeptidase activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Biological Process'''
* GO:0010382 cellular cell wall metabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0043164 Gram-negative-bacterium-type cell wall biogenesis ([http://www.geneontology.org/GO.evidence.shtml IMP])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype

Revision as of 19:22, 2 February 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ycbB

Gene Synonym(s)

ECK0916, b0925, JW0908, ycbB'[1][2]

Product Desc.

predicted carboxypeptidase[2]; predicted carboxypeptidase/amidase[3]

Murein L,D-transpeptidase, periplasmic [4]

Product Synonyms(s)

predicted carboxypeptidase[1], B0925[2][1], YcbB[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ycbB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(ycbB)    Textpresso(ycbB)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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YcbB catalyzes the rare meso-DAP(3)-->meso-DAP(3) murein cross-links (Magnet, 2008).The first 30 aa are predicted to be a type I signal peptide. ErfK family.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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