zupT:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''zupT'' | ''zupT'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ygiE, ECK3031, b3040, JW3008''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ygiE, ECK3031, b3040, JW3008''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Zn transport protein (ZIP family)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | Zn transport protein (ZIP family)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Zinc and other divalent cation uptake transporter<ref name='LIB:EcoGene'/> | Zinc and other divalent cation uptake transporter<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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zinc transporter<ref name='LIB:Riley_2006'/>, B3040<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | zinc transporter<ref name='LIB:Riley_2006'/>, B3040<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgiE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0015684 ferrous iron transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0006824 cobalt ion transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0006831 low-affinity zinc ion transport ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
* GO:0006828 manganese ion transport ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
* GO:0015677 copper ion import ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:zupT|zupT]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:zupT|zupT]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=zupT&loc=MG1655:3180572..3181345,W3110:3181206..3181979,DH10B:3278317..3279090 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3278317&end=3279090&gene=zupT&aa=msvpliltilagaatfigaflgvlgqkpsnrllafslgfaagimllislmemlpaalaaegmspvlgygmfifgllgyfgldrmlphahpqdlmqksvqplpksikrtailltlgislhnfpegiatfvtassnlelgfgialavalhnipeglavagpvyaatgskrtailwagisglaeilggvlawlilgsmispvvmaaimaavagimvalsvdelmplakeidpnnnpsygvlcgmsvmgfslvllqtagig Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=zupT+AND+escherichia+coli Pubmed(zupT)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=zupT Textpresso(zupT)] | |||
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Revision as of 22:49, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
zupT |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
Zn transport protein (ZIP family)[2][3] Zinc and other divalent cation uptake transporter[4] |
| Product Synonyms(s) | |
| Function from GO |
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The zupT synonym ygiE was mistakenly used to refer to ygjE in the abstract of Oshima, 2006 (see the ygjE bibliography).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.