yjjL:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''yjjL'' | ''yjjL'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''yjiZ, ECK4346, b4356, JW4319''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''yjiZ, ECK4346, b4356, JW4319''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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YjiZ MFS transporter<ref name='LIB:EcoCyc10.6'/>; L-galactonate MFS transporter<ref name='LIB:EcoCyc11.1'/> | YjiZ MFS transporter<ref name='LIB:EcoCyc10.6'/>; L-galactonate MFS transporter<ref name='LIB:EcoCyc11.1'/> | ||
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L-galactonate transporter; mutants fail to grow on L-galactonate (Reed, 2006); membrane protein<ref name='LIB:EcoGene'/> | L-galactonate transporter; mutants fail to grow on L-galactonate (Reed, 2006); membrane protein<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted transporter product<ref name='LIB:Riley_2006'/>, B4356 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjjL product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjiZ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted transporter product<ref name='LIB:Riley_2006'/>, B4356 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjjL product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjiZ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0042873 aldonate transport ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yjiZ|yjiZ]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yjiZ|yjiZ]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=yjjL&loc=MG1655:4592745..4591384,W3110:4599402..4598041 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4599402&end=4598041&gene=yjjL&aa=mekenitidprssftpsssadipvppdglvqrstrikriqttamlllffaavinyldrsslsvanltireelglsateigallsvfslaygiaqlpcgplldrkgprlmlglgmffwslfqamsgmvhnftqfvlvrigmgigeapmnpcgvkvindwfnikergrpmgffnaastigvavsppilaammlvmgwrgmfitigvlgiflaigwymlyrnrehveltaveqaylnagsvnarrdplsfaewrslfrnrtmwgmmlgfsginytawlylawlpgylqtaynldlkstglmaaipflfgaagmlvngyvtdwlvkggmapiksrkiciiagmfcsaaftlivpqattsmtavlligmalfcihfagtscwglihvavasrmtasvgsiqnfasficasfapiitgfivdtthsfrlaliicgcvtaagalayiflvrqpindprkd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yjjL+AND+escherichia+coli Pubmed(yjjL)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yjjL Textpresso(yjjL)] | |||
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Revision as of 22:54, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yjjL |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
YjiZ MFS transporter[2]; L-galactonate MFS transporter[3] L-galactonate transporter; mutants fail to grow on L-galactonate (Reed, 2006); membrane protein[4] |
| Product Synonyms(s) |
predicted transporter product[1], B4356 product[2][1], YjjL product[2][1], YjiZ product[2][1] |
| Function from GO |
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Major Facilitator Superfamily (MFS). Evidence for transport function is indirect: mutants fail to grow on D-galactonate and YjjL is an MFS transporter family member. Upregulated during growth on D-galactonate (Reed, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.