yidQ:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yidQ''  
''yidQ''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3680, b3688, JW5633, o135, ecfI''<ref name='LIB:Riley_2006'/>
''ECK3680, b3688, JW5633, o135, ecfI''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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conserved outer membrane protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
conserved outer membrane protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Probable lipoprotein, function unknown; Cys conserved<ref name='LIB:EcoGene'/>
Probable lipoprotein, function unknown; Cys conserved<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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conserved outer membrane protein<ref name='LIB:Riley_2006'/>, B3688<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EcfI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YidQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
conserved outer membrane protein<ref name='LIB:Riley_2006'/>, B3688<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EcfI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YidQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yidQ|yidQ]]<ref name='LIB:EcoCyc10.6'/>, GN03948; ecfI;  
transcription unit(s): [[:Category:Txn_unit:yidQ|yidQ]]<ref name='LIB:EcoCyc10.6'/>, GN03948; ecfI;  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yidQ&loc=MG1655:3865751..3866083,W3110:3772687..3772355,REL606:3828089..3828421,DH10B:3963335..3963667 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3963335&end=3963667&gene=yidQ&aa=mmmlfsardrynssgqhprstdefimirnvllafmicsgmtllggcssvmshtggkegtypgtrasatmigddetnwgtkslaildmpftavmdtlllpwdvfrkdssvrsrvekseanaqatnavipparmpdn Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yidQ+AND+escherichia+coli Pubmed(yidQ)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yidQ Textpresso(yidQ)]


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Revision as of 22:58, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

yidQ

Gene Synonym(s)

ECK3680, b3688, JW5633, o135, ecfI[1]

Product Desc.

conserved outer membrane protein[2][3]

Probable lipoprotein, function unknown; Cys conserved[4]

Product Synonyms(s)

conserved outer membrane protein[1], B3688[2][1], EcfI[2][1], YidQ[2][1]

Function from GO
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yidQ[2], GN03948; ecfI;

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(yidQ)    Textpresso(yidQ)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


yceK and yidQ are paralogs. First 20 aa are a predicted type II signal peptide.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.