yfaE:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''yfaE'' | ''yfaE'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK2228, b2236, JW2230''<ref name='LIB:Riley_2006'/> | ''ECK2228, b2236, JW2230''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
conserved hypothetical protein, 2Fe-2S ferredoxin-related<ref name='LIB:EcoCyc10.6'/>; predicted 2Fe-2S cluster-containing protein<ref name='LIB:EcoCyc11.1'/> | conserved hypothetical protein, 2Fe-2S ferredoxin-related<ref name='LIB:EcoCyc10.6'/>; predicted 2Fe-2S cluster-containing protein<ref name='LIB:EcoCyc11.1'/> | ||
| Line 41: | Line 41: | ||
Ferredoxin involved with ribonucleotide reductase cofactor; diferric-tyrosyl radical (Y*) cofactor maintenance<ref name='LIB:EcoGene'/> | Ferredoxin involved with ribonucleotide reductase cofactor; diferric-tyrosyl radical (Y*) cofactor maintenance<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
predicted 2Fe-2S cluster-containing protein<ref name='LIB:Riley_2006'/>, YfaE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2236<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted 2Fe-2S cluster-containing protein<ref name='LIB:Riley_2006'/>, YfaE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B2236<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Cellular Component''' | |||
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0006732 coenzyme metabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0006124 ferredoxin metabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Molecular Function''' | |||
* GO:0009055 electron carrier activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): | transcription unit(s): | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=yfaE&loc=MG1655:2346536..2346790,W3110:2353184..2353438,REL606:2295222..2295476,DH10B:2437524..2437778 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2437524&end=2437778&gene=yfaE&aa=marvtlritgtqllcqdehpsllaaleshnvaveyqcregycgscrtrlvagqvdwiaeplafiqpgeilpcccrakgdieiem Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yfaE+AND+escherichia+coli Pubmed(yfaE)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yfaE Textpresso(yfaE)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 23:07, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
yfaE |
|---|---|
| Gene Synonym(s) |
ECK2228, b2236, JW2230[1] |
| Product Desc. |
conserved hypothetical protein, 2Fe-2S ferredoxin-related[2]; predicted 2Fe-2S cluster-containing protein[3] Ferredoxin involved with ribonucleotide reductase cofactor; diferric-tyrosyl radical (Y*) cofactor maintenance[4] |
| Product Synonyms(s) |
predicted 2Fe-2S cluster-containing protein[1], YfaE[2][1], B2236[2][1] |
| Function from GO |
Cellular Component
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Putative third gene in nrdAB-yfaE operon.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.