yejB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yejB''  
''yejB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2172, b2178, JW2166''<ref name='LIB:Riley_2006'/>
''ECK2172, b2178, JW2166''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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YejB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
YejB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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ABC transporter permease protein for microcin C uptake; regulated by rydC sRNA<ref name='LIB:EcoGene'/>
ABC transporter permease protein for microcin C uptake; regulated by rydC sRNA<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted oligopeptide transporter subunit<ref name='LIB:Riley_2006'/>, membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B2178<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YejB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted oligopeptide transporter subunit<ref name='LIB:Riley_2006'/>, membrane component of ABC superfamily<ref name='LIB:Riley_2006'/>, B2178<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YejB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0042626 ATPase activity, coupled to transmembrane movement of substances ([http://www.geneontology.org/GO.evidence.shtml ISS])
'''Biological Process'''
* GO:0042884 microcin transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Cellular Component'''
* GO:0043190 ATP-binding cassette (ABC) transporter complex ([http://www.geneontology.org/GO.evidence.shtml ISS])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yejA|yejA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yejA|yejA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yejB&loc=MG1655:2272201..2273295,W3110:2277513..2278607,REL606:2225367..2226461,DH10B:2363189..2364283 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2363189&end=2364283&gene=yejB&aa=mgaylirrlllviptlwaiitinffivqiapggpvdqaiaaiefgnagvlpgaggegvrashaqtgvgnisdsnyrggrgldpeviaeithrygfdkpiheryfkmlwdyirfdfgdslfrsasvltlikdslpvsitlglwstliiylvsiplgirkavyngsrfdvwssafiiigyaipaflfaillivffaggsyfdlfplrglvsanfdslpwyqkitdylwhitlpvlatviggfaaltmltknsfldevrkqyvvtarakgvseknilwkhvfrnamllviagfpatfismfftgsllievmfslnglgllgyeatvsrdypvmfgtlyiftliglllnivsdisytlvdpridfegr Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yejB+AND+escherichia+coli Pubmed(yejB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yejB Textpresso(yejB)]


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Revision as of 23:07, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

yejB

Gene Synonym(s)

ECK2172, b2178, JW2166[1]

Product Desc.

YejB[2][3];

Component of YejA/YejB/YejE/YejF ABC transporter[2][3]

ABC transporter permease protein for microcin C uptake; regulated by rydC sRNA[4]

Product Synonyms(s)

predicted oligopeptide transporter subunit[1], membrane component of ABC superfamily[1], B2178[2][1], YejB[2][1]

Function from GO

Molecular Function

  • GO:0042626 ATPase activity, coupled to transmembrane movement of substances (ISS)

Biological Process

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yejA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(yejB)    Textpresso(yejB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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YejABEF microcin C ABC transport system.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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