yddG:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yddG''  
''yddG''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1467, b1473, JW1469''<ref name='LIB:Riley_2006'/>
''ECK1467, b1473, JW1469''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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hypothetical protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
hypothetical protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Aromatic amino acid exporter<ref name='LIB:EcoGene'/>
Aromatic amino acid exporter<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted methyl viologen efflux pump<ref name='LIB:Riley_2006'/>, B1473<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YddG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted methyl viologen efflux pump<ref name='LIB:Riley_2006'/>, B1473<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YddG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005302 L-tyrosine transmembrane transporter activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0015192 L-phenylalanine transmembrane transporter activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0015196 L-tryptophan transmembrane transporter activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Biological Process'''
* GO:0015823 phenylalanine transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0015827 tryptophan transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0015828 tyrosine transport ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yddG|yddG]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yddG|yddG]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yddG&loc=MG1655:1545136..1544312,W3110:1548826..1548002,DH10B:1635788..1634907,REL606:1521262..1520438 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1521262&end=1520438&gene=yddG&aa=mtrqkatligliaivlwstmvglirgvseglgpvggaaaiyslsgllliftvgfprirqipkgyllagsllfvsyeiclalslgyaathhqaievgmvnylwpsltilfailfngqktnwlivpglllalvgvcwvlggdnglhydeiinnittsplsyflafigafiwaayctvtnkyargfngitvfvlltgaslwvyyfltpqpemifstpvmiklisaaftlgfayaawnvgilhgnvtimavgsyftpvlssalaavllsaplsfsfwqgalmvcggsllcwlatrrg Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yddG+AND+escherichia+coli Pubmed(yddG)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yddG Textpresso(yddG)]


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Revision as of 23:15, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

yddG

Gene Synonym(s)

ECK1467, b1473, JW1469[1]

Product Desc.

hypothetical protein[2][3]

Aromatic amino acid exporter[4]

Product Synonyms(s)

predicted methyl viologen efflux pump[1], B1473[2][1], YddG[2][1]

Function from GO

Molecular Function

  • GO:0005302 L-tyrosine transmembrane transporter activity (IMP)
  • GO:0015192 L-phenylalanine transmembrane transporter activity (IMP)
  • GO:0015196 L-tryptophan transmembrane transporter activity (IMP)

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yddG[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(yddG)    Textpresso(yddG)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YddG belongs to the EamA/RhaT transporter family, DMT superfamily.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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