ycgR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ycgR'' | ''ycgR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1182, b1194, JW1183''<ref name='LIB:Riley_2006'/> | ''ECK1182, b1194, JW1183''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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protein involved regulation of flagellar motility<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | protein involved regulation of flagellar motility<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Cyclic-di-GMP receptor, regulates motility; mutation suppresses motility defect of hns and yhjH mutants<ref name='LIB:EcoGene'/> | Cyclic-di-GMP receptor, regulates motility; mutation suppresses motility defect of hns and yhjH mutants<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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protein involved in flagellar function<ref name='LIB:Riley_2006'/>, B1194<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcgR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | protein involved in flagellar function<ref name='LIB:Riley_2006'/>, B1194<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YcgR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ycgR|ycgR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ycgR|ycgR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ycgR&loc=MG1655:1243750..1243016,W3110:1246104..1245370,DH10B:1283991..1283257,REL606:1244677..1243943 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1244677&end=1243943&gene=ycgR&aa=mshyheqflkqnplavlgvlrdlhkaaiplrlswnggqliskllaitpdklvldfgsqaedniavlkaqhititaetqgakveftveqlqqseylqlpafitvppptlwfvqrrryfrisaplhppyfcqtkladnstlrfrlydlslggmgalletakpaelqegmrfaqievnmgqwgvfhfdaqlisiserkvidgknetittprlsfrflnvsptverqlqriifslerearekadkvrd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ycgR+AND+escherichia+coli Pubmed(ycgR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ycgR Textpresso(ycgR)] | |||
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Revision as of 23:16, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ycgR |
|---|---|
| Gene Synonym(s) |
ECK1182, b1194, JW1183[1] |
| Product Desc. |
protein involved regulation of flagellar motility[2][3] Cyclic-di-GMP receptor, regulates motility; mutation suppresses motility defect of hns and yhjH mutants[4] |
| Product Synonyms(s) |
protein involved in flagellar function[1], B1194[2][1], YcgR[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YcgR contains a C-terminal PilZ domain, which binds cyclic-di-GMP; binding of c-di-GMP is involved in motility regulation. FlhDC flagellar regulon.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.